bde35bf9d06a82fa4d60fcf3259f43259a93b0c5 ccpowell Tue Jul 9 16:11:04 2019 -0700 Swapping MySQL to MariaDB in docs, refs #23597 diff --git src/hg/htdocs/Neandertal/index.html src/hg/htdocs/Neandertal/index.html index 95b0e7b..79a9a92 100755 --- src/hg/htdocs/Neandertal/index.html +++ src/hg/htdocs/Neandertal/index.html @@ -257,31 +257,31 @@ <TBODY> <TR><TD><a name="Downloads"></a><font size="4"><b> Downloads</b></font> </TD></TR> </TBODY> </TABLE> <TABLE width="100%" bgcolor="#fffee8" border="0" cellpadding="0"> <TBODY> <TR><TH height="3"><BR></TH> <TD><BR></TD> </TR> <TR><TD width="10"><BR></TD> <TD> <P> Data files for tracks at UCSC can be downloaded at the locations below. -Files that end with .sql and .txt.gz are dumped from our MySQL +Files that end with .sql and .txt.gz are dumped from our MariaDB database; .sql files name the data fields of each row, and .txt.gz files contain all rows with tab-separated fields. All database dump files have a first column "bin" that can be ignored (it is for database query speedup). Files that end in .bam and .bai contain compressed sequence alignments and index files in the <A HREF="http://samtools.sourceforge.net/SAM1.pdf" TARGET=_BLANK>BAM</A> format. The free software packages <A HREF="http://samtools.sourceforge.net/" TARGET=_BLANK>samtools</A> and <A HREF="http://picard.sourceforge.net/" TARGET=_BLANK>PICARD</A> are useful for viewing and manipulating BAM files.