9e3fea3eabab398560715780a111a3fd2c6eac75
hiram
  Tue Jul 9 10:04:59 2019 -0700
lastz chainNet to regenRn0 and rheMac10 refs #21579 #23771

diff --git src/hg/makeDb/trackDb/trackDb.chainNet.ra src/hg/makeDb/trackDb/trackDb.chainNet.ra
index f481f68..4bab191 100644
--- src/hg/makeDb/trackDb/trackDb.chainNet.ra
+++ src/hg/makeDb/trackDb/trackDb.chainNet.ra
@@ -2743,30 +2743,81 @@
     subGroups view=chain
     shortLabel $o_Organism Chain
     longLabel $o_Organism ($o_date) Chained Alignments
     type chain mm5
     html chainNet
 
     track netMm5
     release alpha
     parent chainNetMm5
     subGroups view=net
     shortLabel $o_Organism Net
     longLabel $o_Organism ($o_date) Alignment Net
     type netAlign mm5 chainMm5
     html chainNet
 
+track chainNetRegenRn0
+compositeTrack on
+shortLabel $o_Organism Chain/Net
+longLabel $o_Organism ($o_date), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+group compGeno
+noInherit on
+priority 209
+color 0,0,0
+altColor 100,50,0
+type bed 3
+sortOrder view=+
+matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91
+matrixHeader A, C, G, T
+otherDb regenRn0
+chainMinScore 3000
+chainLinearGap medium
+spectrum on
+html chainNet
+
+    track chainNetRegenRn0Viewchain
+    shortLabel Chain
+    view chain
+    visibility pack
+    parent chainNetRegenRn0
+    spectrum on
+
+        track chainRegenRn0
+        parent chainNetRegenRn0Viewchain
+        subGroups view=chain
+        shortLabel $o_Organism Chain
+        longLabel $o_Organism ($o_date) Chained Alignments
+        type chain regenRn0
+        html chainNet
+
+    track chainNetRegenRn0Viewnet
+    shortLabel Net
+    view net
+    visibility full
+    parent chainNetRegenRn0
+
+        track netRegenRn0
+        parent chainNetRegenRn0Viewnet
+        subGroups view=net
+        shortLabel $o_Organism Net
+        longLabel $o_Organism ($o_date) Alignment Net
+        type netAlign regenRn0 chainRegenRn0
+        html chainNet
+
 track chainNetRn6
 compositeTrack on
 shortLabel $o_Organism Chain/Net
 longLabel $o_Organism ($o_date), Chain and Net Alignments
 subGroup1 view Views chain=Chain net=Net
 dragAndDrop subTracks
 visibility hide
 group compGeno
 noInherit on
 priority 209
 color 0,0,0
 altColor 100,50,0
 type bed 3
 sortOrder view=+
 matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91