574532b972ccb3d1ee900ccfb000782ffd0b6a2d dschmelt Thu Aug 8 16:07:02 2019 -0700 Fixing typo for code reviewq #23955 diff --git src/hg/htdocs/FAQ/FAQblat.html src/hg/htdocs/FAQ/FAQblat.html index 8971b7b..b89ef79 100755 --- src/hg/htdocs/FAQ/FAQblat.html +++ src/hg/htdocs/FAQ/FAQblat.html @@ -149,31 +149,31 @@
standalone Blat:
blat -stepSize=5 -repMatch=2253 -minScore=20 -minIdentity=0
database.2bit query.fa output.psl
faToTwoBit:
gfServer (this is how the UCSC web-based Blat servers are configured):
gfServer start blatMachine portX -stepSize=5 -log=untrans.log
database.2bit
gfServer start blatMachine portY -trans -mask -log=trans.log
database.2bit
For enabling DNA/DNA and DNA/RNA matches, only the host, port and twoBit files are needed. The same port is used for both untranslated BLAT (gfClient) and PCR (webPcr). You'll need a separate