d7cb3ff035b797a86966dc555a651a2fd3ab76fe kent Fri Aug 9 09:23:24 2019 -0700 Making a symbol with dots in it for input field name because we need to make sure it works. diff --git src/tabFile/tabToTabDir/test/in.tsv src/tabFile/tabToTabDir/test/in.tsv index 733fadd..a41331a 100644 --- src/tabFile/tabToTabDir/test/in.tsv +++ src/tabFile/tabToTabDir/test/in.tsv @@ -1,16 +1,16 @@ -#data_set_id fluidics_chip meta title assay enriched_in access lab cell_count pmid submitter species organ_anatomical_name pipeline submission_date update_date geo_series GEO_Series_summary ncbi_bio_project sra_study lab_quake_fluidics_chip GEO_Sample_age biosample_source_age_value biosample_source_age_unit biosample_source_life_stage GEO_Sample_platform_id biosample_source_id biosample_source_gender sample_label assay_platform biosample_cell_type ncbi_bio_sample seq_sample geo_sample lab_quake_cell +#data_set_id fluidics_chip symbol.with.dots title assay enriched_in access lab cell_count pmid submitter species organ_anatomical_name pipeline submission_date update_date geo_series GEO_Series_summary ncbi_bio_project sra_study lab_quake_fluidics_chip GEO_Sample_age biosample_source_age_value biosample_source_age_unit biosample_source_life_stage GEO_Sample_platform_id biosample_source_id biosample_source_gender sample_label assay_platform biosample_cell_type ncbi_bio_sample seq_sample geo_sample lab_quake_cell quakeBrainGeo1 Fluidigm C1 SRR1974543 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 oligodendrocytes SAMN03486326 GSM1657871 GSM1657871 1772078217.C03 quakeBrainGeo1 Fluidigm C1 SRR1974544 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486327 GSM1657872 GSM1657872 1772078217.C04 quakeBrainGeo1 Fluidigm C1 SRR1974545 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 oligodendrocytes SAMN03486328 GSM1657873 GSM1657873 1772078217.C06 quakeBrainGeo1 Fluidigm C1 SRR1974546 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486329 GSM1657874 GSM1657874 1772078217.C07 quakeBrainGeo1 Fluidigm C1 SRR1974547 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486330 GSM1657875 GSM1657875 1772078217.C08 quakeBrainGeo1 Fluidigm C1 SRR1974548 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 oligodendrocytes SAMN03486331 GSM1657876 GSM1657876 1772078217.C09 quakeBrainGeo1 Fluidigm C1 SRR1974549 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 oligodendrocytes SAMN03486332 GSM1657877 GSM1657877 1772078217.C14 quakeBrainGeo1 Fluidigm C1 SRR1974550 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486333 GSM1657878 GSM1657878 1772078217.C16 quakeBrainGeo1 Fluidigm C1 SRR1974551 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486334 GSM1657879 GSM1657879 1772078217.C17 quakeBrainGeo1 Fluidigm C1 SRR1974552 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486335 GSM1657880 GSM1657880 1772078217.C18 quakeBrainGeo1 Fluidigm C1 SRR1974553 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 oligodendrocytes SAMN03486336 GSM1657881 GSM1657881 1772078217.C20 quakeBrainGeo1 Fluidigm C1 SRR1974554 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486337 GSM1657882 GSM1657882 1772078217.C23 quakeBrainGeo1 Fluidigm C1 SRR1974555 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486338 GSM1657883 GSM1657883 1772078217.C28 quakeBrainGeo1 Fluidigm C1 SRR1974556 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 hybrid SAMN03486339 GSM1657884 GSM1657884 1772078217.C29 quakeBrainGeo1 Fluidigm C1 SRR1974557 A survey of human brain transcriptome diversity at the single cell level long-RNA-seq exon all quake 1 26060301 spyros Homo sapiens brain quakeRnaPipeline2.txt 2015-04-14 2015-07-02 GSE67835 We used single cell RNA sequencing on 466 cells to capture the cellular complexity of the adult and fetal human brain at a whole transcriptome level. Healthy adult temporal lobe tissue was obtained from epileptic patients during temporal lobectomy for medically refractory seizures. We were able to classify individual cells into all of the major neuronal, glial, and vascular cell types in the brain. PRJNA281204 SRP057196 1772078217 postnatal 54 years 54 year postpartum GPL18573 AB_S8 female temporal lobe cortex - healthy tissue from epileptic patient Illumina NextSeq 500 astrocytes SAMN03486340 GSM1657885 GSM1657885 1772078217.C32