ab553b2a1e248cdc8108d39f5e2a8d859216f15b
hiram
  Tue Sep 17 14:21:12 2019 -0700
fix list chromosomes function for bigDataUrl tracks on database genomes refs #23589

diff --git src/hg/hubApi/tests/makefile src/hg/hubApi/tests/makefile
index 5727567..566ac2a 100644
--- src/hg/hubApi/tests/makefile
+++ src/hg/hubApi/tests/makefile
@@ -1,23 +1,23 @@
 
 test:: all
 
 all:: test0 listFunctions getFunctions listSchema getSequence wigData \
 	supportedTypes errorTests notSupported bugReports
 
 listFunctions: list01 list02 list03 list04 list05 list06 list07 list08 list09 \
-	list10 list11 list12 list13 list14 list15
+	list10 list11 list12 list13 list14 list15 list16
 
 getFunctions: test8 test9 test10 test11 test12 test13 test14 \
 	test15 test16 test19 test21 test26 test27 test28 \
 	test29 test39 test40
 
 listSchema: schema01 schema02 schema03 schema04 schema05 schema06 schema07
 
 getSequence: getSeq01 getSeq02 getSeq03 getSeq04 getSeq05
 
 wigData: wig01 wig02 wig03 wig04 wig05 wig06 wig07 wig08 wig09 wig10 \
 	wig11 wig12 wig13 wig14 wig15 wig16 wig17 wig18 wig19 wig20 \
 	wig21 wig22 wig23 wig24
 
 supportedTypes: altGraphX barChart chain ctgPos expRatio factorSource gvf \
 	interact netAlign peptideMapping pgSnp
@@ -130,30 +130,38 @@
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # testing /list/chromosomes?genome=ce11&track=est different chrom name column
 list14: setOutput
 	@printf "### $@ 'https://hgwdev-hiram.gi.ucsc.edu/cgi-bin/hubApi/list/chromosomes?track=est;genome=ce11'\n"
 	@./jsonConsumer.pl -endpoint="/list/chromosomes" -genome="ce11" -track="est" 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#;' | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # testing /list/chromosomes?genome=ce4&track=est different chrom name column
 # and ce4 has split tables
 list15: setOutput
 	@printf "### $@ 'https://hgwdev-hiram.gi.ucsc.edu/cgi-bin/hubApi/list/chromosomes?track=est;genome=ce4'\n"
 	@./jsonConsumer.pl -endpoint="/list/chromosomes" -genome="ce4" -track="est" 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#;' | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
+# list chromosomes for a track that only has a bigDataUrl specification,
+#    no database table
+# testing /list/chromosomes?genome=equCab3&track=transMapEnsemblV5
+list16: setOutput
+	@printf "### $@ 'https://api-test.gi.ucsc.edu/list/chromosomes?track=transMapEnsemblV5;genome=equCab3'\n"
+	@./jsonConsumer.pl -endpoint="/list/chromosomes" -genome="equCab3" -track="transMapEnsemblV5" 2>&1 | egrep -v "${excludeLines}" | sed -e 's#https://.*/list#/list#;' | gzip -c > testOutput/$@.gz
+	@zdiff expected/$@.gz testOutput/$@.gz
+
 ##########################   getData functions  #############################
 # testing /getData/track?genome=ce11&track=gold
 test8: setOutput
 	@./jsonConsumer.pl -maxItemsOutput=123 -endpoint="/getData/track" -genome="ce11" -track="gold" | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # testing /getData/track?genome=ce11&track=gold&chrom=chrM
 test9: setOutput
 	@./jsonConsumer.pl -endpoint="/getData/track" -genome="ce11" -track="gold" -chrom="chrM" | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz
 
 # testing /getData/track?genome=ce11&track=gold&chrom=chrI&start=1&end=1024
 test10: setOutput
 	@./jsonConsumer.pl -endpoint="/getData/track" -genome="ce11" -track="gold" -chrom="chrI" -start=1 -end=1024 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz
 	@zdiff expected/$@.gz testOutput/$@.gz