b2acdf83569bcb30013ed09d885d3f48b19c1d4e jcasper Wed Sep 11 16:03:26 2019 -0700 Better support for hic composite tracks, and hic trackUi pages now include metadata from the file, refs #22316 diff --git src/hg/hgTrackUi/hgTrackUi.c src/hg/hgTrackUi/hgTrackUi.c index 0641c50..57e5636 100644 --- src/hg/hgTrackUi/hgTrackUi.c +++ src/hg/hgTrackUi/hgTrackUi.c @@ -38,30 +38,31 @@ #include "wikiTrack.h" #include "hubConnect.h" #include "trackHub.h" #include "pcrResult.h" #include "dgv.h" #include "transMapStuff.h" #include "vcfUi.h" #include "bbiFile.h" #include "ensFace.h" #include "microarray.h" #include "trackVersion.h" #include "gtexUi.h" #include "genbank.h" #include "botDelay.h" #include "customComposite.h" +#include "hicUi.h" #ifdef USE_HAL #include "halBlockViz.h" #endif #define MAIN_FORM "mainForm" #define WIGGLE_HELP_PAGE "../goldenPath/help/hgWiggleTrackHelp.html" struct cart *cart = NULL; /* Cookie cart with UI settings */ char *database = NULL; /* Current database. */ char *chromosome = NULL; /* Chromosome. */ struct hash *trackHash = NULL; /* Hash of all tracks in database. */ void tfbsConsSitesUi(struct trackDb *tdb) { @@ -3001,30 +3002,32 @@ dgvUi(tdb); else if (sameString(track, "all_mrna") || sameString(track, "mrna") || sameString(track, "all_est") || sameString(track, "est") || sameString(track, "tightMrna") || sameString(track, "tightEst") || sameString(track, "intronEst") || sameString(track, "xenoMrna") || sameString(track, "xenoEst")) mrnaCfgUi(cart, tdb, tdb->track, NULL, boxed); else if (sameString(track, "lrg")) lrgCfgUi(cart, tdb, tdb->track, NULL, boxed); else if (sameString(track, "lrgTranscriptAli")) lrgTranscriptAliCfgUi(cart, tdb, tdb->track, NULL, boxed); +else if (startsWithWord("hic", tdb->type) && tdbIsComposite(tdb)) + hicCfgUiComposite(cart, tdb, tdb->track, NULL, boxed); // Some hic options aren't available at this level else if (tdb->type != NULL) { // NOTE for developers: please avoid special cases and use cfgTypeFromTdb//cfgByCfgType() // When you do, then multi-view cfg and subtrack cfg will work. eCfgType cType = cfgTypeFromTdb(tdb,FALSE); if (cType != cfgNone) { cfgByCfgType(cType,database, cart, tdb,tdb->track, NULL, boxed); if (startsWith("gtexGene", track)) gtexGeneUi(cart, tdb, tdb->track, NULL, TRUE); else if (startsWith("gtexEqtlCluster", track)) gtexEqtlClusterUi(cart, tdb, tdb->track, NULL, TRUE); #ifdef USE_HAL if (cType == cfgSnake) cfgHalSnake(tdb, tdb->track); #endif