9ef5f7a93d3b60eeb501170a76be3e5b019bf6ae hiram Thu Oct 10 12:51:22 2019 -0700 eliminate dependency on genbank changing track to test genePred refs #23589 diff --git src/hg/hubApi/tests/makefile src/hg/hubApi/tests/makefile index 06543d3..cdb8bd6 100644 --- src/hg/hubApi/tests/makefile +++ src/hg/hubApi/tests/makefile @@ -209,33 +209,33 @@ # bigBed data from a database # /getData/track? genome=galGal6 &track=ncbiRefSeqOther&chrom=chr1&start=750000&end=5700000 test19: setOutput @./jsonConsumer.pl -endpoint="/getData/track" -genome="galGal6" -track="ncbiRefSeqOther" -chrom="chr1" -start=750000 -end=55700000 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # wiggle data from a database where the SQL table name is different than the # track name # /getData/track? genome=hg19 &track=wgEncodeRegMarkH3k4me1H1hesc&chrom=chr1&start=62300000&end=62301000 test21: setOutput @./jsonConsumer.pl -endpoint="/getData/track" -genome="hg19" -track="wgEncodeRegMarkH3k4me1H1hesc" -chrom="chr1" -start=62300000 -end=62301000 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing genePred track -# /getData/track?genome=ce11&chrom=chrV&track=refGene&start=5231045&end=5241045 +# /getData/track?genome=ce11&chrom=chrV&track=augustusGene&start=5231045&end=5241045 test26: setOutput - @./jsonConsumer.pl -endpoint="/getData/track" -genome="ce11" -track="refGene" -chrom="chrV" -start=5231045 -end=5241045 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz + @./jsonConsumer.pl -endpoint="/getData/track" -genome="ce11" -track="augustusGene" -chrom="chrV" -start=5231045 -end=5241045 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing PSL track # /getData/track?genome=ce11&chrom=chrV&track=ncbiRefSeqPsl&start=5231045&end=5241045 test27: setOutput @./jsonConsumer.pl -endpoint="/getData/track" -genome="ce11" -track="ncbiRefSeqPsl" -chrom="chrV" -start=5231045 -end=5241045 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # testing RMSK track # /getData/track?genome=ce11&debug=0&chrom=chrV&track=rmsk&start=5231045&end=5241045 test28: setOutput @./jsonConsumer.pl -endpoint="/getData/track" -genome="ce11" -track="rmsk" -chrom="chrV" -start=5231045 -end=5241045 | egrep -v "${excludeLines}" | gzip -c > testOutput/$@.gz @zdiff expected/$@.gz testOutput/$@.gz # test superTrack child getData