ba8b284fa2d2a06ef112c06ecfacf5a135c7742d markd Thu Sep 26 10:35:36 2019 -0700 import of gencode V32 final diff --git src/hg/makeDb/doc/hg38/gencode.txt src/hg/makeDb/doc/hg38/gencode.txt index 6f07418..befded6 100644 --- src/hg/makeDb/doc/hg38/gencode.txt +++ src/hg/makeDb/doc/hg38/gencode.txt @@ -547,19 +547,19 @@ # redo do above imports for t in tables/* ; do cmp ../gencodeV32pre/$t $t > ; done Changes: wgEncodeGencode2wayConsPseudoV32.gp wgEncodeGencodeAttrsV32.tab wgEncodeGencodePolyaV32.gp wgEncodeGencodeTagV32.tab only attrs and maybe tags matter to hgGene gencode mkdir pre-diffs diff ../gencodeV32pre/tables/wgEncodeGencodeAttrsV32.tab tables/wgEncodeGencodeAttrsV32.tab >pre-diffs/wgEncodeGencodeAttrsV32.diff diff ../gencodeV32pre/tables/wgEncodeGencodeTagV32.tab tables/wgEncodeGencodeTagV32.tab >pre-diffs/wgEncodeGencodeTagV32.diff - # attrs: experimental conformation level changed on a few pseudo genes - # tag: pseudo_consens changed on a few pseudo genes. + # wgEncodeGencodeAttrsV32: experimental conformation level changed on a few pseudo genes + # wgEncodeGencodeTagV32: pseudo_consens changed on a few pseudo genes. #########################################################################