1501c6b2ee52ef133b74150ebb88ced8e65ca50a markd Thu Sep 26 11:46:55 2019 -0700 import of GENCODE VM23 diff --git src/hg/makeDb/doc/mm10.txt src/hg/makeDb/doc/mm10.txt index a921af6..286b439 100644 --- src/hg/makeDb/doc/mm10.txt +++ src/hg/makeDb/doc/mm10.txt @@ -18124,20 +18124,20 @@ # redo do above imports for t in tables/* ; do cmp ../gencodeVM23pre/$t $t ; done Changes: wgEncodeGencode2wayConsPseudoVM23.gp wgEncodeGencodeAttrsVM23.tab wgEncodeGencodePolyaVM23.gp wgEncodeGencodeTagVM23.tab only attrs and maybe tags matter to hgGene gencode mkdir pre-diffs diff ../gencodeVM23pre/tables/wgEncodeGencodeAttrsVM23.tab tables/wgEncodeGencodeAttrsVM23.tab >pre-diffs/wgEncodeGencodeAttrsVM23.diff diff ../gencodeVM23pre/tables/wgEncodeGencodeTagVM23.tab tables/wgEncodeGencodeTagVM23.tab >pre-diffs/wgEncodeGencodeTagVM23.diff - # wgEncodeGencodeAttrsVM23: experimental conformation level changed on a few pseudogenes + # wgEncodeGencodeAttrsVM23: experimental confirmation level changed on a few pseudogenes # wgEncodeGencodeTagVM23: pseudo_consens changed on a few pseudogenes. #########################################################################