99e41c7f76633c836d8788f2f99aa77d996519a2
markd
  Mon Oct 28 12:27:30 2019 -0700
Added bedPartition program to calculate non-overlapping ranges in a BED file

diff --git src/hg/utils/makefile src/hg/utils/makefile
index 7acb7b4..dd34ae4 100644
--- src/hg/utils/makefile
+++ src/hg/utils/makefile
@@ -11,30 +11,31 @@
 UNAME_S := $(shell uname -s)
 
 # can not build this on Mac OSX - has functions not supported
 ifeq ($(UNAME_S),Darwin)
   buildRefresh=
 else
   buildRefresh=refreshNamedSessionCustomTracks
 endif
 
 # List of directories to build for userApps
 UTILS_APPLIST = \
 	bedExtendRanges \
 	bedToPsl \
 	bedWeedOverlapping \
 	bedMergeAdjacent \
+	bedPartition \
 	bigMafToMaf \
 	bigPslToPsl \
 	binFromRange \
 	chromGraphFromBin \
 	chromGraphToBin \
 	crTreeIndexBed \
 	crTreeSearchBed \
 	gapToLift \
 	genePredFilter \
 	genePredToBigGenePred \
 	genePredToProt \
 	gff3ToGenePred \
 	gff3ToPsl \
 	gtfToGenePred \
 	hicInfo \
@@ -76,30 +77,31 @@
 	checkUrlsInTable \
 	geoMirrorNode \
 	makeTrackIndex \
 	mysqlSecurityCheck \
 	pslFixCdsJoinGap \
 	pslMismatchGapToBed \
 	pslUniq \
 	refSeqGet \
 	safePush \
 	toDev64 \
 	vcfToHgvs \
 	wigBedToStep
 
 TEST_DIRS = \
 	bedMergeAdjacent \
+	bedPartition \
 	genePredFilter \
 	genePredToProt \
 	gff3ToGenePred \
 	gff3ToPsl \
 	gtfToGenePred \
 	hgvsToVcf \
 	hubCheck \
 	overlapSelect \
 	pslMap \
 	pslRc \
 	pslToBigPsl \
 	refSeqGet \
 	transMapPslToGenePred \
 	vcfToHgvs