98eba6a17b18e4c4693acb669abd4da4f99fd9a6 ccpowell Wed Oct 16 11:38:59 2019 -0700 Final edits to newsarch & indexNew for GENCODE release, refs #24087 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 47089d9..9ee8318 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -59,31 +59,31 @@ <a href="../cgi-bin/hgTracks?db=mm10&g=knownGene" target="_blank">mm10/GRCm38</a> assemblies corresponding to the <a href="http://www.ensembl.info/2019/09/26/ensembl-98-has-been-released/" target="_blank"> Ensembl 98</a> release.</p> <p> The following table provides statistics for the <a href="../cgi-bin/hgTrackUi?db=hg38&g=knownGene" target="_blank">human V32</a> and <a href="../cgi-bin/hgTrackUi?db=mm10&g=knownGene" target="_blank">mouse VM23</a> releases derived from the GTF files that contain annotations only on the main chromosomes. More information on how these statistics were generated can be found on the <a href="https://www.gencodegenes.org/" target="_blank">GENCODE site</a>. <div align="center"> <table class="stdTbl"> - <tr><th>Genes & transcripts</th><th>human V32 Release stats</th><th>mouse V23 Release stats</th></tr> + <tr><th>Genes & Transcripts</th><th>human V32 Release Stats</th><th>mouse V23 Release Stats</th></tr> <tr><th>Protein-coding Genes</th><td style="text-align:center">19,965</td><td style="text-align:center">21,849</td></tr> <tr><th>Protein-coding transcripts</th><td style="text-align:center">83,986</td><td style="text-align:center">59,188</td></tr> <tr><th>Long non-coding RNA genes</th><td style="text-align:center">17,910</td><td style="text-align:center">13,201</td></tr> <tr><th>Small non-coding RNA genes</th><td style="text-align:center">7,576</td><td style="text-align:center">6,108</td></tr> <tr><th>Psuedogenes</th><td style="text-align:center">14,749</td><td style="text-align:center">13,681</td></tr> </table></div> <p> More details about these new GENCODE Genes tracks can be found on the respective GENCODE description pages. We would like to thank the GENCODE team and thank Brian Raney, Mark Diekhans, Jairo Navarro, and Conner Powell at UCSC for their work on this track.</p> <a name="101119"></a> <h2>Oct. 11, 2019 New "group auto-scale" option</h2> <p>