9d362cd8a1ea7e96b4c7230b54c354226ae8a08a
hiram
  Tue Oct 15 11:43:00 2019 -0700
done with crisprAll for mm10 refs #24296

diff --git src/hg/makeDb/doc/mm10.txt src/hg/makeDb/doc/mm10.txt
index 2eb2b2a..ae8627b 100644
--- src/hg/makeDb/doc/mm10.txt
+++ src/hg/makeDb/doc/mm10.txt
@@ -18192,31 +18192,31 @@
 	-chainMinScore=5000 -chainLinearGap=medium) > swap.log 2>&1
     #	real    94m19.060s
 
     cat fb.regenRn1.chainMm10Link.txt
     #   1634389849 bases of 2282482188 (71.606%) in intersection
     cat fb.regenRn1.chainSynMm10Link.txt
     #   1564752158 bases of 2282482188 (68.555%) in intersection
 
     time (doRecipBest.pl -workhorse=hgwdev -load -buildDir=`pwd` regenRn1 mm10) > rbest.log 2>&1
     # real    488m25.471s
 
     cat fb.regenRn1.chainRBest.Mm10.txt
     # 1565313924 bases of 2282482188 (68.579%) in intersection
 
 ##############################################################################
-# crispr whole genome (WORKING - 2019-10-08 - Hiram)
+# crispr whole genome (DONE - 2019-10-08 - Hiram)
     mkdir /hive/data/genomes/mm10/bed/crisprAll
     cd /hive/data/genomes/mm10/bed/crisprAll
 
     # the large shoulder argument will cause the entire genome to be scanned
     time (~/kent/src/hg/utils/automation/doCrispr.pl -verbose=2 -stop=ranges \
     mm10 knownGene -shoulder=250000000 -tableName=crisprAll -fileServer=hgwdev \
     -buildDir=`pwd` -smallClusterHub=hgwdev -bigClusterHub=ku \
       -workhorse=hgwdev) > ranges.log 2>&1
     # real    2m58.652s
 
     time (~/kent/src/hg/utils/automation/doCrispr.pl -verbose=2 \
        -continue=guides -stop=guides \
     mm10 knownGene -shoulder=250000000 -tableName=crisprAll -fileServer=hgwdev \
     -buildDir=`pwd` -smallClusterHub=hgwdev -bigClusterHub=ku \
       -workhorse=hgwdev) > guides.log 2>&1