65adbbcc95d9afa7b8bb9915e5755ae056c525ad
jnavarr5
Tue Oct 15 08:49:22 2019 -0700
Updating http to https for canFam2, uiLinks cronjob
diff --git src/hg/makeDb/trackDb/snp131.html src/hg/makeDb/trackDb/snp131.html
index a9b2003..c24a2ff 100644
--- src/hg/makeDb/trackDb/snp131.html
+++ src/hg/makeDb/trackDb/snp131.html
@@ -46,31 +46,31 @@
Validation: Method used to validate
the variant (each variant may be validated by more than one method)
- By Frequency - at least one submitted SNP in cluster has frequency data submitted
- By Cluster - cluster has at least 2 submissions, with at least one submission assayed with a non-computational method
- By Submitter - at least one submitter SNP in cluster was validated by independent assay
- By 2 Hit/2 Allele - all alleles have been observed in at least 2 chromosomes
- By HapMap - submitted by HapMap project (human only)
-
- By 1000Genomes - submitted by By 1000Genomes - submitted by 1000Genomes project (human only)
- Unknown - no validation has been reported for this variant
Function: dbSNP's predicted functional effect of variant on RefSeq transcripts,
both curated (NM_* and NR_*) as in the RefSeq Genes track and predicted (XM_* and XR_*),
not shown in UCSC Genome Browser.
A variant may have more than one functional role if it overlaps
multiple transcripts.
For filtering and coloring, function terms are grouped into more
general categories:
- Locus Region - variation is 3' to and within 500 bases of a