65adbbcc95d9afa7b8bb9915e5755ae056c525ad jnavarr5 Tue Oct 15 08:49:22 2019 -0700 Updating http to https for canFam2, uiLinks cronjob diff --git src/hg/makeDb/trackDb/snp131.html src/hg/makeDb/trackDb/snp131.html index a9b2003..c24a2ff 100644 --- src/hg/makeDb/trackDb/snp131.html +++ src/hg/makeDb/trackDb/snp131.html @@ -46,31 +46,31 @@ </LI> <LI> <A name="Valid"></A> <B><A HREF="https://www.ncbi.nlm.nih.gov/SNP/snp_legend.cgi?legend=validation" target="_blank">Validation</A></B>: Method used to validate the variant (<I>each variant may be validated by more than one method</I>)<BR> <UL> <LI><B>By Frequency</B> - at least one submitted SNP in cluster has frequency data submitted <LI><B>By Cluster</B> - cluster has at least 2 submissions, with at least one submission assayed with a non-computational method <LI><B>By Submitter</B> - at least one submitter SNP in cluster was validated by independent assay <LI><B>By 2 Hit/2 Allele</B> - all alleles have been observed in at least 2 chromosomes <LI><B>By HapMap</B> - submitted by <A HREF="https://hapmap.ncbi.nlm.nih.gov/" TARGET=_BLANK>HapMap</A> project (human only) - <LI><B>By 1000Genomes</B> - submitted by <A HREF= "http://www.internationalgenome.org/" + <LI><B>By 1000Genomes</B> - submitted by <A HREF= "https://www.internationalgenome.org/" TARGET=_BLANK>1000Genomes</A> project (human only) <LI><B>Unknown</B> - no validation has been reported for this variant </UL> </LI> <LI> <A name="Func"></A> <B>Function</B>: dbSNP's predicted functional effect of variant on RefSeq transcripts, both curated (NM_* and NR_*) as in the RefSeq Genes track and predicted (XM_* and XR_*), not shown in UCSC Genome Browser. A variant may have more than one functional role if it overlaps multiple transcripts. For filtering and coloring, function terms are grouped into more general categories:<BR> <UL> <LI><B>Locus Region</B> - variation is 3' to and within 500 bases of a