d3752edc12da1bf08427946150f564dbdd5d2254 angie Thu Oct 24 13:55:51 2019 -0700 bigDbSnp track handler code - initial commit. refs #23283 * dnautil: Added trimRefAltLeft to get left-justified trimming (a la VCF not HGVS). * bigBedClick: do hReplaceGbdb up front in parseDetailsTablUrls instead of waiting until endpoint. * trackDbCustom.c: consolidating type-handling for wig/bigWig vs. bigBed-based big*. diff --git src/hg/hgTracks/simpleTracks.c src/hg/hgTracks/simpleTracks.c index c957451..6aa6a31 100644 --- src/hg/hgTracks/simpleTracks.c +++ src/hg/hgTracks/simpleTracks.c @@ -14020,30 +14020,36 @@ else if (sameWord(type, "bigChain")) { tdb->canPack = TRUE; wordCount++; words[1] = "11"; track->isBigBed = TRUE; chainMethods(track, tdb, wordCount, words); } else if (sameWord(type, "bigGenePred")) { tdb->canPack = TRUE; wordCount++; words[1] = "12"; bigBedMethods(track, tdb, wordCount, words); } +else if (sameWord(type, "bigDbSnp")) + { + tdb->canPack = TRUE; + track->isBigBed = TRUE; + bigDbSnpMethods(track); + } else if (sameWord(type, "bedGraph")) { bedGraphMethods(track, tdb, wordCount, words); } else if (sameWord(type, "bigWig")) { bigWigMethods(track, tdb, wordCount, words); } else #endif /* GBROWSE */ if (sameWord(type, "wig")) { wigMethods(track, tdb, wordCount, words); } else if (startsWith("wigMaf", type))