ed5ce60aead88beb9296ead6b2a47def40086f89
jnavarr5
  Thu Oct 24 16:34:16 2019 -0700
Udpating a redirected link for the LRG track for hg38 and hg19, refs #24285

diff --git src/hg/makeDb/trackDb/human/lrgTranscriptAli.html src/hg/makeDb/trackDb/human/lrgTranscriptAli.html
index c4a2976..1521f67 100644
--- src/hg/makeDb/trackDb/human/lrgTranscriptAli.html
+++ src/hg/makeDb/trackDb/human/lrgTranscriptAli.html
@@ -1,65 +1,64 @@
 <H2>Description</H2>
 <P>
 This track shows the fixed (unchanging) transcript(s) associated with
 each 
 <A HREF="http://www.lrg-sequence.org/"
 TARGET=_BLANK>Locus Reference Genomic (LRG)</A> sequence.
 LRG
 sequences are manually curated, stable DNA sequences that surround a
 locus (typically a gene) and provide an unchanging coordinate system
 for reporting sequence variants.  They are not necessarily identical
 to the corresponding sequence in a particular reference genome
 assembly (such as $date), but can be mapped to each version of a
 reference genome assembly in order to convert between the stable LRG
 variant coordinates and the various assembly coordinates.
 </P>
 <P>
 The LRG Regions track, in the Mapping and Sequencing Tracks section,
 includes more information about the LRG including the HGNC gene symbol
 for the gene at that locus, source of the LRG sequence, and summary of
 differences between LRG sequence and the genome assembly.
 </P>
 
 <H2>Methods</H2>
 <P>
 LRG sequences are suggested by the community studying a locus (for example,
 Locus-Specific Database curators, research laboratories, mutation consortia).
 LRG curators then examine the submitted transcript as well as other known
 transcripts at the locus, in the context of alignment and public expression
 data.
 For more information on the selection and annotation process, see the 
 <A HREF="http://www.lrg-sequence.org/faq/" TARGET=_BLANK>LRG FAQ</A>,
 (Dalgleish, <em>et al.</em>) and (MacArthur, <em>et al.</em>).
 </P>
 
 <H2>Credits</H2>
 <P>
 This track was produced at UCSC using
 <A HREF="ftp://ftp.ebi.ac.uk/pub/databases/lrgex/" TARGET=_BLANK>LRG XML files</A>.
 Thanks to
-<A HREF="http://www.lrg-sequence.org/documentation/lrg-collaborators/" TARGET=_BLANK>LRG collaborators</A>
-for making these data available.
+<A HREF="http://www.lrg-sequence.org/documentation/lrg-collaborators/" TARGET=_BLANK>LRG
+collaborators</A> for making these data available.
 </P>
 
 <H2>References</H2>
 <p>
 Dalgleish R, Flicek P, Cunningham F, Astashyn A, Tully RE, Proctor G, Chen Y, McLaren WM, Larsson P,
 Vaughan BW <em>et al</em>.
 <a href="https://genomemedicine.biomedcentral.com/articles/10.1186/gm145" target="_blank">
 Locus Reference Genomic sequences: an improved basis for describing human DNA variants</a>.
 <em>Genome Med</em>. 2010 Apr 15;2(4):24.
 PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/20398331" target="_blank">20398331</a>; PMC: <a
 href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2873802/" target="_blank">PMC2873802</a>
 </p>
 
 <p>
 MacArthur JA, Morales J, Tully RE, Astashyn A, Gil L, Bruford EA, Larsson P, Flicek P, Dalgleish R,
 Maglott DR <em>et al</em>.
-<a href="https://academic.oup.com/nar/article/42/D1/D873/1059919/Locus-Reference-Genomic-reference-
-sequences-for" target="_blank">
+<a href="https://academic.oup.com/nar/article/42/D1/D873/1059919" target="_blank">
 Locus Reference Genomic: reference sequences for the reporting of clinically relevant sequence
 variants</a>.
 <em>Nucleic Acids Res</em>. 2014 Jan;42(Database issue):D873-8.
 PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/24285302" target="_blank">24285302</a>; PMC: <a
 href="https://www.ncbi.nlm.nih.gov/pmc/articles/PMC3965024/" target="_blank">PMC3965024</a>
 </p>