7ad022adbcd9514fad51c749ec15feb362287b26
hiram
  Mon Nov 25 10:15:20 2019 -0800
adding gorGor6 chain/net definitions refs #24524

diff --git src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra
index 6748058..aa71b6d 100644
--- src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra
+++ src/hg/makeDb/trackDb/trackDb.chainNet.primates.ra
@@ -623,30 +623,83 @@
     track chainNetRheMac1Viewnet
     shortLabel Net
     view net
     visibility full
     parent chainNetRheMac1
 
         track netRheMac1
         parent chainNetRheMac1Viewnet
         subGroups view=net
         shortLabel $o_db Net
         longLabel $o_Organism ($o_date) Alignment net
         type netAlign rheMac1 chainRheMac1
         html chainNet
 
 ################################################################
+# gorGor6 - Gorilla - Gorilla gorilla - primate
+################################################################
+track chainNetGorGor6
+compositeTrack on
+shortLabel $o_Organism Chain/Net
+longLabel $o_Organism ($o_date), Chain and Net Alignments
+subGroup1 view Views chain=Chain net=Net
+dragAndDrop subTracks
+visibility hide
+group compGeno
+noInherit on
+priority 220.3
+color 0,0,0
+altColor 100,50,0
+type bed 3
+sortOrder view=+
+matrixHeader A, C, G, T
+matrix 16 90,-330,-236,-356,-330,100,-318,-236,-236,-318,100,-330,-356,-236,-330,90
+chainMinScore 3000
+chainLinearGap medium
+otherDb gorGor6
+html chainNet
+
+    track chainNetGorGor6Viewchain
+    shortLabel Chain
+    view chain
+    visibility pack
+    parent chainNetGorGor6
+    spectrum on
+
+        track chainGorGor6
+        parent chainNetGorGor6Viewchain
+        subGroups view=chain
+        shortLabel $o_Organism Chain
+        longLabel $o_Organism ($o_date) Chained Alignments
+        type chain gorGor6
+        html chainNet
+
+    track chainNetGorGor6Viewnet
+    shortLabel Net
+    view net
+    visibility full
+    parent chainNetGorGor6
+
+        track netGorGor6
+        parent chainNetGorGor6Viewnet
+        subGroups view=net
+        shortLabel $o_Organism Net
+        longLabel $o_Organism ($o_date) Alignment net
+        type netAlign gorGor6 chainGorGor6
+        html chainNet
+
+################################################################
 # gorGor5 - Gorilla - Gorilla gorilla - primate
 ################################################################
 track chainNetGorGor5
 compositeTrack on
 shortLabel $o_Organism Chain/Net
 longLabel $o_Organism ($o_date), Chain and Net Alignments
 subGroup1 view Views chain=Chain net=Net
 dragAndDrop subTracks
 visibility hide
 group compGeno
 noInherit on
 priority 220.3
 color 0,0,0
 altColor 100,50,0
 type bed 3