Commits for braney

v390_base to v391_preview (2019-11-04 to 2019-11-11) v391

6ee69e5f785ad30ae6171af8b740d2f00f4778a0 Mon Nov 4 12:53:08 2019 -0800

• add autoScale group to doc
  • src/hg/htdocs/goldenPath/help/bigWig.html - lines changed 1, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbDoc.html - lines changed 1, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbHub.v2.html - lines changed 1, context: html, text, full: html, text
  • src/hg/htdocs/goldenPath/help/trackDb/trackDbLibrary.shtml - lines changed 7, context: html, text, full: html, text

890fdad386e5451ba705effa51a3877bce2e4bdb Mon Nov 4 14:26:54 2019 -0800

• added a comment about a function that doesn't work right when an assembly database name has a '.' in it
  • src/hg/js/utils.js - lines changed 2, context: html, text, full: html, text

a2b887e7bae9377807d176890e0958f4a10edecb Mon Nov 4 14:28:40 2019 -0800

• add FilterLabel for labeling bigBed filters
  • src/hg/inc/bigBedFilter.h - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 24, context: html, text, full: html, text

8b84f22d1b235ac3dcc37d35e2c051d3e6e36292 Wed Nov 6 14:08:46 2019 -0800

• generate new CDS FASTA files for multiz30way
  • src/hg/makeDb/doc/hg38/multiz30way.txt - lines changed 106, context: html, text, full: html, text

a3f8d3e1a145ec0893cc654891bcc40c6291c2d7 Wed Nov 6 14:30:33 2019 -0800

• use DESTBINDIR not BINDIR
  • src/utils/chromToUcsc/makefile - lines changed 2, context: html, text, full: html, text

fa980de88752d46a65744d71de7ad813961d4948 Thu Nov 7 06:46:00 2019 -0800

• renamed chromFixer to chromToUcsc
  • src/utils/chromToUcsc/tests/makefile - lines changed 2, context: html, text, full: html, text

336446810facfb8bd5fe6665f736d647d7dc20c0 Thu Nov 7 10:18:44 2019 -0800

• remove brain-dead code that made a distinction between floats and ints in number filtering
  • src/hg/hgTracks/bigBedTrack.c - lines changed 28, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 45, context: html, text, full: html, text

43cc16d8d72f686e8652637128a13c4fd4851c56 Thu Nov 7 14:58:11 2019 -0800

• add logging of current position in error_log
  • src/hg/hgTracks/hgTracks.c - lines changed 3, context: html, text, full: html, text

64b6a6ca9fc9176eb191e2cc2ad6360b980de876 Fri Nov 8 14:29:29 2019 -0800

• fix link without lastDbPos in hgHubConnect
  • src/hg/hgHubConnect/hgHubConnect.c - lines changed 2, context: html, text, full: html, text

1bda3889beb9b9247998d9153dee94ca7d13810c Sun Nov 10 16:16:48 2019 -0800

• allow yet another way to specify bigBed filters. This allows specifications of the form "filter*.fieldName"
  • src/hg/hgTracks/bigBedTrack.c - lines changed 22, context: html, text, full: html, text
  • src/hg/inc/bigBedFilter.h - lines changed 40, context: html, text, full: html, text
  • src/hg/inc/hui.h - lines changed 4, context: html, text, full: html, text
  • src/hg/inc/trackDb.h - lines changed 1, context: html, text, full: html, text
  • src/hg/lib/hui.c - lines changed 206, context: html, text, full: html, text

c59df0037d6bd1b32d797558e227681161ea3ab4 Mon Nov 11 09:59:25 2019 -0800

• v391 preview1, refs #24359
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text