003005fd8409969f6c109853b511afe1f3c163cb max Thu Nov 14 02:13:58 2019 -0800 changes after code review, refs #24465 diff --git src/utils/chromToUcsc/tests/makefile src/utils/chromToUcsc/tests/makefile index 4ac2cea..3ac9e16 100644 --- src/utils/chromToUcsc/tests/makefile +++ src/utils/chromToUcsc/tests/makefile @@ -1,9 +1,14 @@ all: mkdir -p out # alas, our automated tests cannot output anything to stderr, as otherwise emails will be sent python2 `which chromToUcsc` -i in/hg19.bed -o out/hg19.bed -g hg19 -a hg19.chromAlias.tsv 2> /dev/null python2 `which chromToUcsc` -i in/mm10.bed -o out/mm10.bed -a mm10.chromAlias.tsv 2> /dev/null + diff out/hg19.bed expected/hg19.bed + diff out/mm10.bed expected/mm10.bed python3 `which chromToUcsc` -i in/hg19.bed -o out/hg19.bed -g hg19 -a hg19.chromAlias.tsv 2> /dev/null python3 `which chromToUcsc` -i in/mm10.bed -o out/mm10.bed -a mm10.chromAlias.tsv 2> /dev/null diff out/hg19.bed expected/hg19.bed diff out/mm10.bed expected/mm10.bed + +clean: + rm -f out/*