c9e0427feeb5463fcb0a7a508a6ed3eb2480d4b4 max Tue Nov 12 13:16:27 2019 +0100 adding py2/py3 tests to chromFixer, refs #24432 diff --git src/utils/chromToUcsc/tests/makefile src/utils/chromToUcsc/tests/makefile index 5dceb81..290f045 100644 --- src/utils/chromToUcsc/tests/makefile +++ src/utils/chromToUcsc/tests/makefile @@ -1,5 +1,7 @@ all: - chromFixer -i in/hg19.bed -o out/hg19.bed -g hg19 - chromFixer -a mm10.chromAlias.tsv -i in/mm10.bed -o out/mm10.bed + python2 `which chromFixer` -i in/hg19.bed -o out/hg19.bed -g hg19 + python2 `which chromFixer` -a mm10.chromAlias.tsv -i in/mm10.bed -o out/mm10.bed + python3 `which chromFixer` -i in/hg19.bed -o out/hg19.bed -g hg19 + python3 `which chromFixer` -a mm10.chromAlias.tsv -i in/mm10.bed -o out/mm10.bed diff out/hg19.bed expected/hg19.bed diff out/mm10.bed expected/mm10.bed