Commits for braney

v392_preview2 to v392_base (2019-12-16 to 2020-01-06) v392

18b6f4ccf6ea234dd5fb38710763ae335f63e2e7 Mon Dec 16 13:41:09 2019 -0800

• add the groking if filter*.* lines in trackDb to tdbQuery
  • src/hg/utils/tdbQuery/tdbQuery.c - lines changed 14, context: html, text, full: html, text

9bab3e9da3138f67a9d9d4f80b609aefb80e02c9 Mon Dec 23 11:20:20 2019 -0800

• remove duplicates from knownToEnsembl and knownToGencodeV32
  • src/hg/makeDb/doc/ucscGenes/hg38.ucscGenes20.sh - lines changed 1, context: html, text, full: html, text

0846fb5a0028fcdcd90beeec64bc00adafcb9f61 Mon Dec 30 14:38:22 2019 -0800

• allow specifying colors for lollipops, turn off color in TCGA cancer track, make pack mode draw lollies instead of bed modes #24705
  • src/hg/hgTracks/lollyTrack.c - lines changed 93, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg38/gdcCancer.html - lines changed 10, context: html, text, full: html, text
  • src/inc/basicBed.h - lines changed 2, context: html, text, full: html, text
  • src/lib/basicBed.c - lines changed 2, context: html, text, full: html, text

3c7a0656f98136df2c2b6c2d5e36baea9e3bf8bc Wed Jan 1 14:10:09 2020 -0800

• add version number to trackDb cache so if the trackDb structure changes, the "wrong" cached values won't be used.
  • src/hg/inc/trackDb.h - lines changed 9, context: html, text, full: html, text
  • src/hg/lib/trackDbCache.c - lines changed 24, context: html, text, full: html, text

6e8c1a4b9311aa91585a31a5b16716b754b6c1a8 Mon Jan 6 10:04:39 2020 -0800

• v392 final build, refs #24628
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 3, context: html, text, full: html, text

daf028a3af7cea339f52f2be2aa1485eab315583 Mon Jan 6 10:08:11 2020 -0800

• New version number v392
  • src/hg/inc/versionInfo.h - lines changed 1, context: html, text, full: html, text
  • src/inc/srcVersion.h - lines changed 1, context: html, text, full: html, text