db3443c1060188f5e7abe8e640e3f245bd7f8cb7
markd
  Thu Dec 19 11:57:34 2019 -0800
load of gencode V33lift37 prerelease

diff --git src/hg/makeDb/outside/gencode/gencodeLoad.mk src/hg/makeDb/outside/gencode/gencodeLoad.mk
index a30cf41..c77913b 100644
--- src/hg/makeDb/outside/gencode/gencodeLoad.mk
+++ src/hg/makeDb/outside/gencode/gencodeLoad.mk
@@ -24,64 +24,64 @@
 export SHELLOPTS=pipefail
 
 ##
 # programs, etc
 ##
 mach = $(shell uname -m)
 
 ##
 # Release info and files from Sanger.
 # BEGIN EDIT THESE EACH RELEASE
 #
 # - ensemblPrevVersion is use to get chrom name mappings for pre-release,
 #   as this doesn't change between release.
 ##
 #db = hg38
-#db = hg19
-db = mm10
+db = hg19
+#db = mm10
 #preRelease = no
 preRelease = yes
 ifeq (${db},mm10)
     grcRefAssembly = GRCm38
     ver = M24
     prevVer = M23
     gencodeOrg = Gencode_mouse
     ftpReleaseSubdir = release_${ver}
     annGffTypeName = chr_patch_hapl_scaff.annotation
     ensemblVer = 99_38
     ensemblPrevVer = 98_38
     ensemblCDnaDb = mus_musculus_cdna_${ensemblPrevVer}
 else ifeq (${db},hg38)
     grcRefAssembly = GRCh38
     ver = 33
     prevVer = 32
     gencodeOrg = Gencode_human
     ftpReleaseSubdir = release_${ver}
     annGffTypeName = chr_patch_hapl_scaff.annotation
     ensemblVer = 99_38
     ensemblPrevVer = 98_38
     ensemblCDnaDb = homo_sapiens_cdna_${ensemblPrevVer}
 else ifeq (${db},hg19)
     grcRefAssembly = GRCh37
-    verBase = 32
+    verBase = 33
     ver = ${verBase}lift37
     backmapTargetVer = 19
     ftpReleaseSubdir = release_${verBase}/GRCh37_mapping
-    prevVer = 29lift37
+    prevVer = 32lift37
     gencodeOrg = Gencode_human
     annGffTypeName = annotation
-    ensemblVer = 74_37      # only used to get genome chromsome name mappings
+    ensemblVer = 74_37      # only used to get genome chromsome name mappings, don't change
     ensemblPrevVer = ${ensemblVer}  # doesn't change
     ensemblCDnaDb = homo_sapiens_cdna_${ensemblPrevVer}
     isBackmap = yes
 else
     $(error unimplement genome database: ${db})
 endif
 # END EDIT THESE EACH RELEASE
 
 
 ifeq (${preRelease},yes)
     # pre-release
     baseUrl = ftp://ftp.ebi.ac.uk/pub/databases/havana/gencode_pre
 else
     # official release
     baseUrl = ftp://ftp.ebi.ac.uk/pub/databases/gencode