aa048e375b37cade56f3f3f2c3a35fc16fb357a0 max Fri Jan 17 05:38:23 2020 -0800 adding NCBI Refseq Select track, refs #24787 diff --git src/hg/makeDb/trackDb/refSeqComposite.ra src/hg/makeDb/trackDb/refSeqComposite.ra index 2cd4081..78ef904 100644 --- src/hg/makeDb/trackDb/refSeqComposite.ra +++ src/hg/makeDb/trackDb/refSeqComposite.ra @@ -76,30 +76,42 @@ baseColorUseCds table ncbiRefSeqCds idXref ncbiRefSeqLink mrnaAcc name color 0,0,0 pepTable ncbiRefSeqPepTable track ncbiRefSeqGenomicDiff parent refSeqComposite off priority 6 type bigBed 9 + skipEmptyFields on shortLabel RefSeq Diffs longLabel Differences between NCBI RefSeq Transcripts and the Reference Genome bigDataUrl /gbdb/$D/ncbiRefSeq/ncbiRefSeqGenomicDiff.bb itemRgb on + track ncbiRefSeqSelect + parent refSeqComposite off + priority 7 + type genePred + shortLabel RefSeq Select + longLabel NCBI RefSeq Select: representative transcripts, usually one per protein-coding gene + trackHandler ncbiRefSeq + idXref ncbiRefSeqLink mrnaAcc name + color 20,20,160 + baseColorUseCds given + baseColorDefault genomicCodons + track ncbiRefSeqHgmd parent refSeqComposite off priority 7 type genePred shortLabel RefSeq HGMD longLabel Only NCBI RefSeq manually annotated transcripts with at least one HGMD clinical variant trackHandler ncbiRefSeq idXref ncbiRefSeqLink mrnaAcc name color 20,20,160 baseColorUseCds given baseColorDefault genomicCodons track ncbiRefSeqMane parent refSeqComposite off priority 8