Commits for chmalee

v394_preview2 to v394_base (2020-02-10 to 2020-02-17) v394

be6bc76d6d45a41a4bf9c7ca96b404ea38ab306c Mon Feb 10 15:45:43 2020 -0800

• Fixing a bunch of archiveTracks.sh typos pointed out by code review, refs #24936
  • src/hg/utils/archiveTracks.sh - lines changed 5, context: html, text, full: html, text

336ccdf9413a7b2e54a99e9384ce1b2d73431b41 Tue Feb 11 08:02:40 2020 -0800

• Noting that archiveTracks works on a list of databases too, refs #24936
  • src/hg/utils/archiveTracks.sh - lines changed 2, context: html, text, full: html, text

8d89592cc2ddc307ab8d75f68cdc4caa1411792c Wed Feb 12 16:24:21 2020 -0800

• Adding filters to dgv tracks on hg38, refs #24749
  • src/hg/makeDb/trackDb/human/hg38/trackDb.ra - lines changed 20, context: html, text, full: html, text

4351a6f72e80bce13726edf01d8a404557c8ae63 Thu Feb 13 10:57:09 2020 -0800

• Make lovd otto build script more descriptive when it fails
  • src/hg/utils/otto/lovd/checkAndLoad.sh - lines changed 2, context: html, text, full: html, text

cbbdd7331c4477e84f01020a41e44d8ccec900a0 Thu Feb 13 12:56:22 2020 -0800

• Fixing bad decoding problem in clinvar build script
  • src/hg/utils/otto/clinvar/clinVarToBed - lines changed 5, context: html, text, full: html, text

3454b18249705d49114125631b628ccd8e498fe3 Thu Feb 13 18:26:43 2020 -0800

• Fixing up the pLI description page after feedback from Lou and Ana, still need to add a small part about the track methods used to generate teh missense constraint track, refs #20394
  • src/hg/makeDb/trackDb/human/hg19/gnomadPLI.html - lines changed 37, context: html, text, full: html, text

94d6890bdac9d6c53a6070eef9bcb82611c7d25f Fri Feb 14 11:32:08 2020 -0800

• Adding mouseOver to missense constraint track and finishing up track description, refs #20394
  • src/hg/makeDb/doc/hg19.txt - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/gnomad/aaToGenomic.py - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/gnomadPLI.html - lines changed 8, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/human/hg19/trackDb.gnomad.ra - lines changed 2, context: html, text, full: html, text