50d467281f8b23157c18f32327de0dc3703338a1
galt
  Thu Feb 13 15:31:03 2020 -0800
The rest of the changes for cirm from index.html to cirmIndex.html

diff --git src/hg/cirm/gateway/htdocs/README src/hg/cirm/gateway/htdocs/README
index 93a30e7..9b7e2dc 100644
--- src/hg/cirm/gateway/htdocs/README
+++ src/hg/cirm/gateway/htdocs/README
@@ -1,36 +1,36 @@
 
 
 USING htmlCheck and setRoot:
 
 Note that you can use htmlCheck with several useful commands either directly on the .html files in the 
 location where we edit the .html files (kent/src/hg/cirm/gateway/htdocs),
 
 or by using a url like 
- https://cirm-01-galt.cirm/index.html
+ https://cirm-01-galt.cirm/cirmIndex.html
 
 You can also login to cirmdcm from hgwdev with your password for testing:
- https://galt%40soe.ucsc.edu:mypassword@cirmdcm.soe.ucsce.edu/index.html
+ https://galt%40soe.ucsc.edu:mypassword@cirmdcm.soe.ucsce.edu/cirmIndex.html
 
 It is helpful to run htmlCheck with both the validate and strictTagNestCheck commands since they cover different things.
 This will find errors in the html syntax.
 
 htmlCheck getLinks is very handy for displaying all of the links and making sure they are properly formed and properly relative.
 To be properly relative, they should not start with the slash / character because that is an absolute path.
 
 This error is harmless:
-https://cirm-01-galt.cirm/index.html# doesn't exist
+https://cirm-01-galt.cirm/cirmIndex.html# doesn't exist
 It just means that the menu method employed has some dummy URLs "#" in dropdowns.
 
 This one filters out the internal # tags and off-site links to focus on the rest 
 and make sure they are correct and relative.
 htmlCheck getLinks 'https://cirm-01-galt.cirm/projects.html' | egrep -v '(http|^#)'
 
 
 Specific domain that is unwanted:
 Also, you should not use a domain in the URL like cirmdcm.soe.ucsc.edu because we do not need it and also it will fail when pushed to the public server.
 
 Obviously, if the link is something that is going completely off-site, then a protocol and domain are needed.
 
 Also, if it is a special case like a link labelled as taking the user specifically and only to the public site,
 then it would be ok to specify https://cirm.ucsc.edu.