b53ca06391134031e25470547b8a2cbfe34c6f85 jnavarr5 Tue Feb 11 09:54:55 2020 -0800 Updating redirected links found for galGal5, uiLinks cronjob. diff --git src/hg/makeDb/trackDb/chicken/snp147.shared.html src/hg/makeDb/trackDb/chicken/snp147.shared.html index 55bc22d..159eedf 100644 --- src/hg/makeDb/trackDb/chicken/snp147.shared.html +++ src/hg/makeDb/trackDb/chicken/snp147.shared.html @@ -238,31 +238,31 @@ </LI> <LI> <A name="Bitfields"></A> <B>Miscellaneous Attributes (dbSNP)</B>: several properties extracted from dbSNP's SNP_bitfield table (see <A HREF="ftp://ftp.ncbi.nlm.nih.gov/snp/specs/dbSNP_BitField_v5.pdf" target="_blank">dbSNP_BitField_v5.pdf</A> for details) <UL> <LI><B>Clinically Associated</B> (human only) - SNP is in OMIM and/or at least one submitter is a Locus-Specific Database. This does not necessarily imply that the variant causes any disease, only that it has been observed in clinical studies.</LI> <LI><B>Appears in OMIM/OMIA</B> - SNP is mentioned in <A HREF="https://www.ncbi.nlm.nih.gov/omim" target="_blank">Online Mendelian Inheritance in Man</A> for - human SNPs, or <A HREF="http://omia.org/home/" + human SNPs, or <A HREF="https://omia.org/home/" target="_blank">Online Mendelian Inheritance in Animals</A> for non-human animal SNPs. Some of these SNPs are quite common, others are known to cause disease; see OMIM/OMIA for more information.</LI> <LI><B>Has Microattribution/Third-Party Annotation</B> - At least one of the SNP's submitters studied this SNP in a biomedical setting, but is not a Locus-Specific Database or OMIM/OMIA.</LI> <LI><B>Submitted by Locus-Specific Database</B> - At least one of the SNP's submitters is associated with a database of variants associated with a particular gene. These variants may or may not be known to be causative.</LI> <LI><B>MAF >= 5% in Some Population</B> - Minor Allele Frequency is at least 5% in at least one population assayed.</LI> <LI><B>MAF >= 5% in All Populations</B> - Minor Allele Frequency is at least 5% in all populations assayed.</LI>