2cbb554c410d05d093ed0ded0b50ebb66c96091e max Fri Feb 14 03:26:03 2020 -0800 documenting rare hg.conf options, email from braney diff --git src/product/ex.hg.conf src/product/ex.hg.conf index dc5b0ef..35b86a1 100644 --- src/product/ex.hg.conf +++ src/product/ex.hg.conf @@ -22,31 +22,31 @@ # db.port=3306 # *!# NOTE: the port override will only work when host is *not* localhost # when localhost is used, MySQL may connect via shared memory # connections and not via TCP/IP socket ports # slow-db is the name of a MySQL host to fallback to if a query failed # on db.host. This means that tables can be dropped from db.host as long as # they are present on slow-db. #slow-db.host=genome-mysql.soe.ucsc.edu #slow-db.user=genomep #slow-db.password=password # If the slow-db host is too far away, a table on db.host with schema information # of the slow-db databases will speed up most tracks. The table is created with # the command "makeTableList" and its name is specified here -# showTableList=tableList +# showTableCache=tableList # If your mysql server is configured to reject the option LOCAL in the command # LOAD DATA INFILE (e.g. in OpenSuse) then you can force the browser to never # use the LOCAL option. Note that for this to work, you have to keep all you # mysql servers on the same machine as the CGIs and these servers must have # file permissions and any security infrastructure like SELinux or AppArmor # setup in a way that allows them to read temporary files that the CGIs # (hgCustom, the custom track loaders) create # db.neverLocal=1 # if you want a different default species selection on the Gateway # page, change this default Human to one of the genomes from the # defaultDb table in hgcentral: # hgsql -e "select genome from defaultDb;" hgcentral # If you need a different version of that specific genome, change @@ -293,32 +293,39 @@ # cart.db= # cart.host= # cart.user= # cart.password= # personalize the background of the browser with a specified jpg # floret.jpg is the standard UCSC default browser.background=../images/floret.jpg # Change this default documentRoot if different in your installation, # to allow some of the browser cgi binaries to find help text files browser.documentRoot=/usr/local/apache/htdocs -# personalize the background of CGIs that don't use images + +# Options to personalize the visual style of the browser +# Personalize the background of CGIs that don't use images #browser.bgcolor=FFF9D2 +# Add a custom CSS file +#browser.style=gbib.css +# Give the user a choice between different background images and CSS files +#browser.theme.modern=background.png,HGStyle +#browser.theme.classic=floret.png,HGStyle-old # optional location of grepIndex files grepIndex.genbank=/data/tmp/grepIndex grepIndex.default=/gbdb # new option for track reording functions, August 2006 hgTracks.trackReordering=on # in case of failure of the above central.host machine, # the following settings will be used to access a secondary # mirror of the database backupcentral.db=hgcentral backupcentral.host=localhost backupcentral.user=readwrite backupcentral.password=update # archivecentral settings are used for archived assemblies