4d824a89a35bdd5eafb2519b4d0ea298adf5451f brianlee Mon Jan 27 14:41:14 2020 -0800 Correcting typo from Code Review refs #24842 diff --git src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html index a7db965..3e0dcae 100755 --- src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html +++ src/hg/htdocs/goldenPath/help/hgWiggleTrackHelp.html @@ -44,31 +44,31 @@ to appear at each track's highest value. And on the right is the new "group auto-scale" setting for the same RNA-seq data where all tracks are scaled against the one track in the region that has the highest value (67215 for IMR9 cell TAP + 1).
Auto-scale comparison
Click this link to interact with the original "auto-scale to data view" on the left, and to contrast the results with the new "group auto-scale" click this link.
  • Note that the "group auto-scale" setting is meant to be turned on and off at the composite group track set level, but you can toggle individual tracks. For instance, click the second "group auto-scale" session link that has all tracks adjusted to the highest value (67215 for IMR9 cell TAP + 1). If you right-click that individual highest track - and instead of configuring the track set, select to configure only the subtract IMR9 cell TAP + 1 + and instead of configuring the track set, select to configure only the subtrack IMR9 cell TAP + 1 from "group auto-scale" to "auto-scale to data view" and select OK and then refresh your browser window (or click one of the "refresh" buttons on the screen) you will see all the tracks adjust to the next-highest track within all tracks still tagged to display "group auto-scale" (39320 for IMR9 cell + 1).
  • Vertical viewing range (boxed in red): The min and max values specify the vertical portion of the graph that is displayed (default range is 30-70). These numbers can be used to set data threshold indicators. For example, to display only those GC values greater than 50 percent, set the min value to "50".

    Transform function: Transforms the data points by the function selected in the drop-down menu. Usually the default setting is "None".

    Windowing function: When a view is too large to show individual data values, the