a32f737bf8921c365afc2234e612e3b7b1507578
markd
  Sat Feb 8 12:24:01 2020 -0800
create mafRc to reverse-completment MAF files

diff --git src/hg/ratStuff/mafRc/makefile src/hg/ratStuff/mafRc/makefile
new file mode 100644
index 0000000..344bdd3
--- /dev/null
+++ src/hg/ratStuff/mafRc/makefile
@@ -0,0 +1,20 @@
+kentSrc = ../../..
+A = mafRc
+include $(kentSrc)/inc/userApp.mk
+
+
+test:: test1 testHg16
+
+test1: mkdirs
+	${BINDIR}/mafRc ../mafSplit/test/test1.maf output/$@-rc.maf
+	diff expected/$@-rc.maf output/$@-rc.maf
+
+testHg16: mkdirs
+	${BINDIR}/mafRc ../mafFrags/expected/hg16.maf output/$@-rc.maf
+	diff expected/$@-rc.maf output/$@-rc.maf
+
+mkdirs:
+	mkdir -p output
+
+clean::
+	rm -rf output