a1f736b4dc8cf37703c5bb6e85818416374e8058
hiram
  Tue Mar 3 11:04:01 2020 -0800
show inputs on startup refs #23891

diff --git src/hg/utils/automation/gff3ToRefLink.pl src/hg/utils/automation/gff3ToRefLink.pl
index 2f09dcf..2983d06 100755
--- src/hg/utils/automation/gff3ToRefLink.pl
+++ src/hg/utils/automation/gff3ToRefLink.pl
@@ -393,21 +393,25 @@
     }
     print "\t$missingData" if (! $gotExt);
     print "\n";
   }
 } # printOutput
 
 #################################################################################
 # MAIN
 
 my $argc = scalar(@ARGV);
 if ($argc != 3) {
   &usage;
 }
 my ($raFile, $gffFile, $labelFile) = @ARGV;
 
+printf STDERR "# raFile: %s\n", $raFile;
+printf STDERR "# gffFile: %s\n", $gffFile;
+printf STDERR "# labelFile: %s\n", $labelFile;
+
 my ($gff, $topLevelIds) = parseGff3($gffFile);
 my ($outColumns) = collectColumns($gff, $topLevelIds);
 my ($descriptionData, $statusData, $proteinId) = parseRaFile($labelFile, $raFile);
 
 printOutput($outColumns, $descriptionData, $statusData, $proteinId);