12454aa5329fdd7d21b31c9d187e07f81e6c082d hiram Mon Mar 2 13:54:04 2020 -0800 correct one line header message in usage() refs #25071 diff --git src/hg/utils/bedToPsl/bedToPsl.c src/hg/utils/bedToPsl/bedToPsl.c index cd8e4df..ef18d7f 100644 --- src/hg/utils/bedToPsl/bedToPsl.c +++ src/hg/utils/bedToPsl/bedToPsl.c @@ -24,31 +24,31 @@ void usage() /* Explain usage and exit. */ { errAbort("bedToPsl - convert bed format files to psl format\n" "usage:\n" " bedToPsl [options] chromSizes bedFile pslFile\n" "\n" "Convert a BED file to a PSL file. This the result is an alignment.\n" " It is intended to allow processing by tools that operate on PSL.\n" "If the BED has at least 12 columns, then a PSL with blocks is created.\n" "Otherwise single-exon PSLs are created.\n\n" "Options:\n" "-tabs - use tab as a separator\n" "-keepQuery - instead of creating a fake query, create PSL with identical query and\n" " target specs. Useful if bed features are to be lifted with pslMap and one \n" - " wants to keep the source location in the lift result.\n" , msg); + " wants to keep the source location in the lift result.\n"); } static struct hash *loadChromSizes(char *chromSizesFile) /* read the chromosome sizes file. */ { struct lineFile *lf = lineFileOpen(chromSizesFile, TRUE); struct hash *sizes = newHash(12); char *words[2]; while (lineFileRow(lf, words)) hashAddInt(sizes, words[0], sqlSigned(words[1])); lineFileClose(&lf); return sizes; } static void bedToPsl4(struct bed *bed, struct psl *psl)