11cd242e75d51c384ededd99808435593abf85de hiram Mon Mar 2 13:09:15 2020 -0800 correct one line header message in usage() refs #25071 diff --git src/hg/pslSwap/pslSwap.c src/hg/pslSwap/pslSwap.c index 2da52a2..a759376 100644 --- src/hg/pslSwap/pslSwap.c +++ src/hg/pslSwap/pslSwap.c @@ -1,59 +1,57 @@ /* pslSwap - reverse target and query in psls */ #include "common.h" #include "linefile.h" #include "dnautil.h" #include "options.h" #include "psl.h" /* command line options */ static struct optionSpec optionSpecs[] = { {"noRc", OPTION_BOOLEAN}, {NULL, 0} }; boolean gNoRc = FALSE; -void usage(char *msg) +void usage() /* usage message and abort */ { -errAbort("%s:\n" +errAbort("pslSwap - swap target and query in psls\n" + "usage:\n" " pslSwap [options] inPsl outPsl\n" "\n" - "Swap target and query in psls\n" - "\n" "Options:\n" " -noRc - don't reverse complement untranslated alignments to\n" " keep target positive strand. This will make the target strand\n" - " explict.\n", - msg); + " explict.\n"); } void pslSwapFile(char *inPslFile, char *outPslFile) /* reverse target and query in a psl file */ { struct lineFile *inLf = pslFileOpen(inPslFile); FILE *outFh = mustOpen(outPslFile, "w"); struct psl *psl; while ((psl = pslNext(inLf)) != NULL) { pslSwap(psl, gNoRc); pslTabOut(psl, outFh); pslFree(&psl); } carefulClose(&outFh); lineFileClose(&inLf); } int main(int argc, char** argv) /* entry */ { optionInit(&argc, argv, optionSpecs); if (argc != 3) - usage("wrong # args"); + usage(); gNoRc = optionExists("noRc"); dnaUtilOpen(); pslSwapFile(argv[1], argv[2]); return 0; }