22a9ec8b34dd60a14257bdef408f21c03db601b4
hiram
  Mon Feb 17 16:06:38 2020 -0800
now using the shorter assembly name for genome identifier and fix some common names refs #23891

diff --git src/hg/makeDb/doc/asmHubs/makefile src/hg/makeDb/doc/asmHubs/makefile
new file mode 100644
index 0000000..917cfef
--- /dev/null
+++ src/hg/makeDb/doc/asmHubs/makefile
@@ -0,0 +1,37 @@
+
+hubDirs = primates mammals birds fish vertebrate
+
+all:
+	@echo "potential targets: symLinks index genomes"
+
+symLinks::
+	@for D in ${hubDirs} x; do \
+	    if test "$$D" != "x" && test -d "../$${D}AsmHub" ; then \
+		(cd ../$${D}AsmHub && echo $$D && make symLinks ) ;\
+	    x=$$? ; if [ $$x -ne 0 ]; then exit $$x ; fi \
+	    fi ;\
+	done
+
+genomes::
+	@for D in ${hubDirs} x; do \
+	    if test "$$D" != "x" && test -d "../$${D}AsmHub" ; then \
+		(cd ../$${D}AsmHub && echo $$D && make mkGenomes ) ;\
+	    x=$$? ; if [ $$x -ne 0 ]; then exit $$x ; fi \
+	    fi ;\
+	done
+
+index::
+	@for D in ${hubDirs} x; do \
+	    if test "$$D" != "x" && test -d "../$${D}AsmHub" ; then \
+		(cd ../$${D}AsmHub && echo $$D && make hubIndex ) ;\
+	    x=$$? ; if [ $$x -ne 0 ]; then exit $$x ; fi \
+	    fi ;\
+	done
+
+asmStats::
+	@for D in ${hubDirs} x; do \
+	    if test "$$D" != "x" && test -d "../$${D}AsmHub" ; then \
+		(cd ../$${D}AsmHub && echo $$D && make asmStats ) ;\
+	    x=$$? ; if [ $$x -ne 0 ]; then exit $$x ; fi \
+	    fi ;\
+	done