fa8b8585e87d433f26deca1d476b122f1425ca96 kuhn Wed Feb 19 13:59:44 2020 -0800 added some hyphens where needed diff --git src/hg/htdocs/FAQ/FAQlink.html src/hg/htdocs/FAQ/FAQlink.html index c1dbeef..d800a4d 100755 --- src/hg/htdocs/FAQ/FAQlink.html +++ src/hg/htdocs/FAQ/FAQlink.html @@ -4,31 +4,31 @@
The easiest way to save and share tracks from the URL is by logging in to your Genome Browser account and creating a saved session. Saved sessions are a versatile way to share data that may include native annotations, Custom Tracks, Track Hubs, and Assembly Hubs. In these examples, text in brackets "<" and ">" indicate places where the user supplies information. Note that the brackets are not needed for the URL, including the brackets will result in a 'Could not find session' error.
@@ -194,31 +194,31 @@ To link to an assembly hub and display data on a non-natively supported genome, the same parameters apply. To specify the intended genome assembly, instead of usingdb=
,
you must use genome=araTha1
, where araTha1 is the assembly name set by
your genomes.txt file in the line genome araTha1
.
https://genome.ucsc.edu/cgi-bin/hgTracks?genome=araTha1&hubUrl=http://genome.ucsc.edu/goldenPath/help/examples/hubExamples/hubAssembly/plantAraTha1/hub.txt
To see the files behind that assembly hub, please visit the hub's directory. For more information on assembly hubs in general, please see the assembly hub wiki, the track hub user guide, or the quick start guide to assembly hubs. -
To jump directly to a gene's position on the Genome Browser, set the position parameter in the
URL to a gene symbol (e.g., TP53, MTOR, KRAS) and add the parameter
singleSearch=knownCanonical
. For example, the following link will open the
Genome Browser for the hg19 human assembly at the position of TP53 on the knownCanonical dataset
http://genome.ucsc.edu/cgi-bin/hgTracks?db=hg19&singleSearch=knownCanonical&position=TP53
You can also link directly to gene description pages from the URL. Instead of a position search,
gene descriptions use the hgg_gene=
URL parameter. The following URL connecting
to 'hgGene' will open up the Genome Browser description page containing protein function,
expression profile, and links to additional information for the gene TP53.