75778c0fae9df5a460b36ab20cfafd639574534d
hiram
  Wed Feb 26 14:45:15 2020 -0800
need to deliver kmer functions for doTandenDups script refs #23891

diff --git src/hg/utils/automation/makefile src/hg/utils/automation/makefile
index 36a8c81..bd81a53 100644
--- src/hg/utils/automation/makefile
+++ src/hg/utils/automation/makefile
@@ -41,30 +41,33 @@
 	doCpgIslands.pl \
 	doEnsGeneUpdate.pl \
 	doGenscan.pl \
 	doHgNearBlastp.pl \
 	doIdKeys.pl \
 	ensemblInfo.pl \
 	synBlastp.csh \
 	doRecipBest.pl \
 	doRepeatMasker.pl \
 	doWindowMasker.pl \
 	doSimpleRepeat.pl \
 	doSameSpeciesLiftOver.pl \
 	ensVersions \
 	extractNestedRepeats.pl \
 	extractGtf.pl \
+	kmerPairs.pl \
+	kmerCollapsePairedEnds.pl \
+	kmerPrint.pl \
 	liftRMAlign.pl \
 	makeDownloads.pl \
 	makeGenomeDb.pl \
 	makePushQSql.pl \
 	monthlyUpdateIgtc.csh \
 	simplePartition.pl \
 	partitionSequence.pl \
 	updateIgtc.pl \
 	unigene.csh
 
 all: mkDir libFiles $(SCRIPT_FILES:%=%.all)
 
 %.all:
 	rm -f ${SCRIPTS}/$*
 	echo cp -p $* ${SCRIPTS}