File Changes for max

v396_preview2 to v396_base (2020-03-23 to 2020-03-30) v396

• src/hg/makeDb/doc/wuhCor1/crisprDet.txt
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    1e8cea555cb8e85aa840455926f5b2791982ab4a Fri Mar 27 07:51:50 2020 -0700
    adding CRISPR detection makedocs, refs #25247
• src/hg/makeDb/doc/wuhCor1/uniprot.txt
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    6abef9bb8be196d31e998a48558706db8e9d0e3b Thu Mar 26 10:38:06 2020 -0700
    makedoc for uniprot track, refs #25192
• src/hg/makeDb/trackDb/trackDb.uniprot.ra
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    1a9aa64a6b06ec13fd6d5a60c027bb1e2dcd2d60 Wed Mar 25 09:44:16 2020 -0700
    improving name of the uniprot chains track, no redmine, email from Jason Fernandes
• src/hg/makeDb/trackDb/virus/wuhCor1/crisprDet.html
  • lines changed 61, context: html, text, full: html, text
    1e8cea555cb8e85aa840455926f5b2791982ab4a Fri Mar 27 07:51:50 2020 -0700
    adding CRISPR detection makedocs, refs #25247
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    e8d0372512ad2173647348224f61a9d765963456 Fri Mar 27 08:23:06 2020 -0700
    adding funding disclaimer to new cov2 track docs pages
• src/hg/makeDb/trackDb/virus/wuhCor1/epitopes.html
  • lines changed 4, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/epitopes.ra
  • lines changed 1, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
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    efeac498624f4d43d90025929406203e582a1f1f Fri Mar 27 03:45:24 2020 -0700
    adapting epitopes track labels a little, refs #25190 and adding crispr detection track (no redmine yet)
• src/hg/makeDb/trackDb/virus/wuhCor1/gordon.html
  • lines changed 31, context: html, text, full: html, text
    0e34add1cbdc6a3504f97eb89e6bbf21c1f577a2 Fri Mar 27 07:15:32 2020 -0700
    updating gordon wuhCor1 docs page, no redmine yet.
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    e8d0372512ad2173647348224f61a9d765963456 Fri Mar 27 08:23:06 2020 -0700
    adding funding disclaimer to new cov2 track docs pages
• src/hg/makeDb/trackDb/virus/wuhCor1/primers.html
  • lines changed 51, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
  • lines changed 23, context: html, text, full: html, text
    f7969c11afbc35bf440738aceef6b1c7b3a252cd Wed Mar 25 05:08:17 2020 -0700
    fixing small type in uniprot wuhCor1 track, refs #25192
• src/hg/makeDb/trackDb/virus/wuhCor1/rfam.html
  • lines changed 56, context: html, text, full: html, text
    a862248865ad974eac79080875c0c14955f385d0 Thu Mar 26 03:38:06 2020 -0700
    Adding rfam track created by Todd, no redmine yet.
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.119way.ra
  • lines changed 17, context: html, text, full: html, text
    76ef8274d883c50415b2370ce9a3ed761296cb62 Sat Mar 28 13:54:50 2020 -0700
    changing names of conservation tracks, again, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.44way.ra
  • lines changed 7, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
  • lines changed 2, context: html, text, full: html, text
    79356d111b5208faecf0adadc57ac465edb1315a Fri Mar 27 07:13:02 2020 -0700
    tweaking colors of cov2 browser a little, no redmine
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    76ef8274d883c50415b2370ce9a3ed761296cb62 Sat Mar 28 13:54:50 2020 -0700
    changing names of conservation tracks, again, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra
  • lines changed 6, context: html, text, full: html, text
    a862248865ad974eac79080875c0c14955f385d0 Thu Mar 26 03:38:06 2020 -0700
    Adding rfam track created by Todd, no redmine yet.
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    efeac498624f4d43d90025929406203e582a1f1f Fri Mar 27 03:45:24 2020 -0700
    adapting epitopes track labels a little, refs #25190 and adding crispr detection track (no redmine yet)
  • lines changed 4, context: html, text, full: html, text
    79356d111b5208faecf0adadc57ac465edb1315a Fri Mar 27 07:13:02 2020 -0700
    tweaking colors of cov2 browser a little, no redmine
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.strainName44way.ra
  • lines changed 1, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
  • lines changed 21, context: html, text, full: html, text
    76ef8274d883c50415b2370ce9a3ed761296cb62 Sat Mar 28 13:54:50 2020 -0700
    changing names of conservation tracks, again, refs #25090
  • lines changed 1, context: html, text, full: html, text
    ba187a92298451436bf12e9b02dc74b90667d6c8 Sat Mar 28 13:56:29 2020 -0700
    oops, forgot to hide conservation track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.uniprot.ra
  • lines changed 1, context: html, text, full: html, text
    f7969c11afbc35bf440738aceef6b1c7b3a252cd Wed Mar 25 05:08:17 2020 -0700
    fixing small type in uniprot wuhCor1 track, refs #25192
  • lines changed 1, context: html, text, full: html, text
    1a9aa64a6b06ec13fd6d5a60c027bb1e2dcd2d60 Wed Mar 25 09:44:16 2020 -0700
    improving name of the uniprot chains track, no redmine, email from Jason Fernandes
  • lines changed 23, context: html, text, full: html, text
    135241bdf3f8a12e6726bd176523d5644f4990cd Thu Mar 26 03:51:00 2020 -0700
    removing links from uniprot track and fixing missing gene symbols, refs #25192
  • lines changed 40, context: html, text, full: html, text
    4b18b24370a1fceb71c89763f4a828d809fbbcd6 Thu Mar 26 04:24:38 2020 -0700
    removing empty tracks, refs #25192
  • lines changed 24, context: html, text, full: html, text
    efeac498624f4d43d90025929406203e582a1f1f Fri Mar 27 03:45:24 2020 -0700
    adapting epitopes track labels a little, refs #25190 and adding crispr detection track (no redmine yet)
  • lines changed 27, context: html, text, full: html, text
    79356d111b5208faecf0adadc57ac465edb1315a Fri Mar 27 07:13:02 2020 -0700
    tweaking colors of cov2 browser a little, no redmine
  • lines changed 2, context: html, text, full: html, text
    52bcf27ac2a8c54573d4334093ec5be374684c11 Sat Mar 28 14:18:34 2020 -0700
    small rename of aa modifs track after email from Phil Berman, refs #25192
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    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
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    906da37654b6560c7d2fae3e0d2404dc64eeed34 Mon Mar 30 00:42:27 2020 -0700
    forgot mouse over field for cov-2 uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2AliSwissprot.html
  • lines changed 111, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
  • lines changed 4, context: html, text, full: html, text
    df8403b9311c8dea639311b38dcd9365b2dd7170 Thu Mar 26 10:43:20 2020 -0700
    adding small note to uniprot docs page
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2DisulfBond.html
  • lines changed 182, context: html, text, full: html, text
    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2Domain.html
  • lines changed 182, context: html, text, full: html, text
    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2Interest.html
  • lines changed 129, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2LocSignal.html
  • lines changed 182, context: html, text, full: html, text
    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2LocTransMemb.html
  • lines changed 182, context: html, text, full: html, text
    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2Modif.html
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    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2Repeat.html
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    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/unipCov2Struct.html
  • lines changed 182, context: html, text, full: html, text
    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090
• src/hg/makeDb/trackDb/virus/wuhCor1/uniprotCov2.html
  • lines changed 2, context: html, text, full: html, text
    63bd15f1095ff7e49ee401533b6507ed830f1deb Tue Mar 24 04:55:11 2020 -0700
    Cov2 work: adding funding disclaimers to various help pages, making primers and uniprots docs nicer, adding help to conservation tracks and adding IEDB prefix to epitopes track. refs #25189, refs #25190, refs #25090
  • lines changed 14, context: html, text, full: html, text
    b88c4c7dfc4ebda2ee1daa62c2b3fc1c2f18406c Sat Mar 28 15:40:33 2020 -0700
    adding docs pages for uncomposited uniprot track, refs #25090