00ebc6c645c3a9d8e668d3670031b53d8180d235
jnavarr5
  Tue Mar 10 11:10:54 2020 -0700
Adding a note about how to add other partitions for GBiC data, refs #25056

diff --git src/hg/htdocs/goldenPath/help/gbic.html src/hg/htdocs/goldenPath/help/gbic.html
index 270860d..a08177c 100755
--- src/hg/htdocs/goldenPath/help/gbic.html
+++ src/hg/htdocs/goldenPath/help/gbic.html
@@ -126,30 +126,44 @@
         <li>US server: Port 3306 on genome-mysql.soe.ucsc.edu (128.114.119.174)</li>
         <li>European server: Port 3306 on genome-euro-mysql.soe.ucsc.edu (129.70.40.120)</li>
       </ul></li>
     <li> Rsync, used to download track data:
       <ul>
         <li>US server: TCP port 873 on hgdownload.soe.ucsc.edu (128.114.119.163)</li>
         <li>European server: TCP port 873 on hgdownload-euro.soe.ucsc.edu (129.70.40.99)</li>
       </ul></li>
     <li>Download HTML descriptions on the fly:
       <ul>
         <li>US server: TCP port 80 on hgdownload.soe.ucsc.edu (128.114.119.163)</li>
         <li>European server: TCP port 80 on hgdownload-euro.soe.ucsc.edu (129.70.40.99)</li>
       </ul></li>
   </ul></p>
 
+<h3>Root file system too small for all data</h3>
+<p>
+If you need to move data to another partition because the root file system is too small for all
+of the assembly's data, the following steps will help complete the installation. First, create the
+following directories and then make symlinks to the directory that will contain the data:
+<pre>
+mkdir /home/xxx/storage1/gbdb
+mkdir /home/xxx/storage1/mysql
+
+ln -s /home/xxx/storage1/mysql /var/lib/mysql
+ln -s /home/xxx/storage1/gbdb /gbdb
+</pre>
+</p>
+
 <a name='gbic-commands'></a>
 <h2>GBiC Commands</h2>
 
 <p>
 The first argument of the program is called <code>command</code> in the following section of this document.
 The first command that you will need is <code>install</code>, which installs the Genome Browser dependencies,
 binary files and basic MySQL (MariaDB) infrastructure:
 </p>
 
 <pre><code>sudo bash browserSetup.sh install</code></pre>
 
 <p>
 There are a number of options supported by the GBiC program. In all cases, options must
 be specified before the command.
 </p>