16b8c8c9b543c60efe18a2bf14113ca4c6cea236 jcasper Fri Apr 17 15:12:19 2020 -0700 Updating trackDb for enhLutNer1, refs #21152 diff --git src/hg/makeDb/trackDb/trackDb.chainNet.laurasiatheria.ra src/hg/makeDb/trackDb/trackDb.chainNet.laurasiatheria.ra index c5b812d..fc0d6e0 100644 --- src/hg/makeDb/trackDb/trackDb.chainNet.laurasiatheria.ra +++ src/hg/makeDb/trackDb/trackDb.chainNet.laurasiatheria.ra @@ -1926,15 +1926,74 @@ track chainNetCamFer1Viewnet release alpha shortLabel Net view net visibility dense parent chainNetCamFer1 track netCamFer1 release alpha parent chainNetCamFer1Viewnet subGroups view=net shortLabel $o_Organism Net longLabel $o_Organism ($o_date) Alignment Net type netAlign camFer1 chainCamFer1 html chainNet + +################################################################ +# enhLutNer1 - Southern sea otter - Enhydra lutris nereis - mammal - carnivora - 1049777 +################################################################ +track chainNetEnhLutNer1 +release alpha +compositeTrack on +shortLabel $o_Organism Chain/Net +longLabel $o_Organism ($o_date), Chain and Net Alignments +subGroup1 view Views chain=Chain net=Net +dragAndDrop subTracks +visibility hide +group compGeno +noInherit on +priority 415.80 +color 0,0,0 +altColor 255,255,0 +type bed 3 +sortOrder view=+ +matrix 16 91,-114,-31,-123,-114,100,-125,-31,-31,-125,100,-114,-123,-31,-114,91 +matrixHeader A, C, G, T +otherDb enhLutNer1 +chainMinScore 3000 +chainLinearGap medium +spectrum on +html chainNet + + track chainNetEnhLutNer1Viewchain + release alpha + shortLabel Chain + view chain + visibility pack + parent chainNetEnhLutNer1 + spectrum on + + track chainEnhLutNer1 + release alpha + parent chainNetEnhLutNer1Viewchain + subGroups view=chain + shortLabel $o_Organism Chain + longLabel $o_Organism ($o_date) Chained Alignments + type chain enhLutNer1 + html chainNet + + track chainNetEnhLutNer1Viewnet + release alpha + shortLabel Net + view net + visibility dense + parent chainNetEnhLutNer1 + + track netEnhLutNer1 + release alpha + parent chainNetEnhLutNer1Viewnet + subGroups view=net + shortLabel $o_Organism Net + longLabel $o_Organism ($o_date) Alignment Net + type netAlign enhLutNer1 chainEnhLutNer1 + html chainNet