f28f9a54bc7ed1af7e2bb8a9d5739d69087fd506 kuhn Sun Apr 19 19:03:34 2020 -0700 releasing video Part Two of Basics series and announcement thereto. Also restoring announcement of Part One, which I apparently neglected to check in and lost to an intervening update diff --git src/hg/htdocs/training/index.html src/hg/htdocs/training/index.html index 07c6b4e..42eee9c 100755 --- src/hg/htdocs/training/index.html +++ src/hg/htdocs/training/index.html @@ -76,55 +76,64 @@ <!-- FUTURE: --> <tr> <td> further:</td> <td> <!-- new row: <br> --> + <del>ESHG Berlin</del> <a href = "https://2020.eshg.org/index.php/programme/sunday/#W05" - target = _blank>ESHG</a> Berlin + target = _blank>now virtual</a> | <del>Brno Czechia</del> | NHGRI | <a href = "https://www.jax.org/education-and-learning/education-calendar/2020/07-july/human-and-mammalian-genetics-and-genomics-the-61st-mckusick-short-course" target = _blank>McKusick course</a> | <del><a href = "https://www.hgsa.org.au/about/HGSA2020-destination-venue" target = _blank>HGSA</a> Adelaide</del> + | <del>Perth</del> + <br> Kansas City | <a href = "http://veptc.variome.org/home.html" target = _blank>VEPTC</a> Barcelona | <a href = "https://www.nsgc.org/conference" target = _blank>NSGC</a> Nashville + | <a href = "http://ashg.org/meetings/2020meeting" + target = _blank>ASHG</a> San Diego + + | <a href = "https://www.acmg.net/ACMG/ACMG/Education/Meetings_and_Events.aspx" + target = _blank>ACMG 2021</a> Los Angeles + </td> </tr> </table> </div> <h2>Online training and tutorials</h2> <p> Our video tutorials address some common questions we've gathered from our <a href = "../contacts.html#queries" target = "_blank">mailing list</a>. Along the way we try to show you interesting features of the Browser you may not have found on your own. @@ -132,30 +141,45 @@ <p> Visit our <a href="https://www.youtube.com/channel/UCQnUJepyNOw0p8s2otX4RYQ/videos" target="_blank" style="background-color:yellow;"> YouTube channel</a> or use the links below. </p> <!-- Left column of vids --> <!-- # this div tag indents, but I don't want it to!!!! --> <div class="row"> <div class="col-md-6"> <h2 style="background-color:#dde6ee; color:black;"> Video tutorials </h2> <ul> <li> + Browser Basics, Part One: + <a class="toc" + href="https://www.youtube.com/watch?v=NBDMNv2KFik&feature=youtu.be&list=UUQnUJepyNOw0p8s2otX4RYQ" + target=_blank> Getting around in the Browser</a>. + [ <a href = "vids/transcript17.pdf" target = _blank>transcript</a> ]</li> + + <li> + <img class="gbsInlineImg" style="border:0px" src="../images/new.jpg" alt="new icon"> + Browser Basics, Part Two: + <a class="toc" + href="https://www.youtube.com/watch?v=cYys5iXN0NY&feature=youtu.be&list=UUQnUJepyNOw0p8s2otX4RYQ" + target=_blank> Configuring the Browser</a>. + [ <a href = "vids/transcript18.pdf" target = _blank>transcript</a> ]</li> + + <li> <a class="toc" href="https://www.youtube.com/watch?v=d5rHBLXwraM&feature=youtu.be&feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>Saving and sharing sessions</a> in the Browser. [ <a href = "vids/transcript16.pdf" target = _blank>transcript</a> ]</li> <li> <a class="toc" href="https://www.youtube.com/watch?v=jKix2B3hwnw&feature=youtu.be&feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>Controlling visibility of data tracks</a> in the Browser. [ <a href = "vids/transcript15.pdf" target = _blank>transcript</a> ]</li> <li> Using the isPCR tool (<a class="toc" href="https://youtu.be/U8_QYwmdGYU?feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>isPCR</a>) in the UCSC Genome Browser. @@ -172,74 +196,83 @@ href="https://www.youtube.com/watch?feature=player_detailpage&v=8ATcoDTOc0g&list=UUQnUJepyNOw0p8s2otX4RYQ" target=_blank>Data Integrator</a>. [ <a href = "vids/transcript12.pdf" target = _blank>transcript</a> ]</li> <li> Finding a <a href="https://www.youtube.com/watch?feature=player_detailpage&v=RjB_N1GpT0U&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">list of genes</a> in a region. [ <a href = "vids/transcript01.pdf" target = _blank>transcript</a> ]</li> <li> Finding <a href = "https://www.youtube.com/watch?v=gK8B6sjzhmM&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">exon numbers</a>. [ <a href = "vids/transcript02.pdf" target = _blank>transcript</a> ]</li> + </ul> +</div> + +<!-- Right column of vids --> +<div class="col-md-6" style="padding-left: 0px;"> +<h2 style="background-color:#dde6ee; color:black"> Video tutorials </h2> + <ul> + <li> Finding all <a href = "https://www.youtube.com/watch?v=Y_cQ3JkhsUQ&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">SNPs in a gene</a>. [ <a href = "vids/transcript03.pdf" target = _blank>transcript</a> ]</li> <li> Finding <a href = "https://www.youtube.com/watch?v=ZqxlBF3vqhY&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">SNPs upstream</a> from a gene. [ <a href = "vids/transcript04.pdf" target = _blank>transcript</a> ]</li> - </ul> -</div> -<!-- Right column of vids --> -<div class="col-md-6" style="padding-left: 0px;"> -<h2 style="background-color:#dde6ee; color:black"> Video tutorials </h2> - <ul> <li> Find <a href = "https://www.youtube.com/watch?v=RQZ4EeYS6Zk&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">which tables belong to a data track</a>. [ <a href = "vids/transcript06.pdf" target = _blank>transcript</a> ]</li> + <li> Identifying <a href="https://www.youtube.com/watch?v=bLnfD799AZw&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">codon numbers</a> in a gene. [ <a href = "vids/transcript07.pdf" target = _blank>transcript</a> ]</li> + <li> Obtaining <a href="https://www.youtube.com/watch?v=6JoUqM1iKxQ&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">exon coordinates and sequences</a>. [ <a href = "vids/transcript08.pdf" target = _blank>transcript</a> ]</li> + <li> <a href="https://www.youtube.com/watch?v=mNEJBOkf_Gk&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">Exon-only</a> display mode (Multi-Region View). [ <a href = "vids/transcript09.pdf" target = _blank>transcript</a> ]</li> + <li> Viewing <a href="https://www.youtube.com/watch?v=0lKYdqQus0I&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">alternate haplotypes</a> (Multi-Region View). [ <a href = "vids/transcript10.pdf" target = _blank>transcript</a> ]</li> + <li> Multi-Region: View <A HREF="https://www.youtube.com/watch?v=ht4sGj1Tlxw&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank"> discontinuous regions </a> in the Browser. [ <a href = "vids/transcript11.pdf" target = _blank>transcript</a> ]</li> + <li> How-to: Genome Browser <A HREF="https://youtu.be/dcJERBVnjio" target="_blank">in the Cloud</a>.</li> + <li> How-to: Genome Browser <A HREF="https://www.youtube.com/watch?v=5zc9sqd4SD4&list=UUQnUJepyNOw0p8s2otX4RYQ" target="_blank">Gateway</a>.</li> <br> </ul> </div> </div> <div class="col-md-12" style="padding-left: 0px;"> <h3>Other content produced at UCSC</h3> <ul> <li> See a collection of interesting Browser views in our