c8321fc1278a2305b36c5a50e042fbf2c92793ab lrnassar Mon Apr 13 14:39:26 2020 -0700 News announcement for ensembl update refs #24963 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 1556ebc..3c5b6b0 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -40,30 +40,139 @@ <div class="col-sm-3"> <ul> <li><a href="#2005">2005 News</a></li> <li><a href="#2004">2004 News</a></li> <li><a href="#2003">2003 News</a></li> <li><a href="#2002">2002 News</a></li> <li><a href="#2001">2001 News</a></li> </ul> </div> </div> </div> <!-- ============= 2020 archived news ============= --> <a name="2020"></a> +<a name="041420"></a> +<h2>Apr. 14, 2019 Updated Ensembl gene tracks for 43 assemblies</h2> +<p> +We are pleased to announce an update to the +<a href="http://uswest.ensembl.org/info/genome/genebuild/index.html" target="_blank"> +Ensembl gene annotation</a> tracks to <strong>v99</strong> for the +following assemblies:</p><br> +<div class="container"> + <div class="row"> + <div class="col-sm-4"> + <ul> + <li>Armadillo <a href="../cgi-bin/hgTrackUi?db=dasNov3&g=ensGene" + target=_blank>(dasNov3)</a></li> + <li>Bison <a href="../cgi-bin/hgTrackUi?db=bisBis1&g=ensGene" + target=_blank>(bisBis1)</a></li> + <li>Bonobo <a href="../cgi-bin/hgTrackUi?db=panPan2&g=ensGene" + target=_blank>(panPan2)</a></li> + <li>Budgerigar <a href="../cgi-bin/hgTrackUi?db=melUnd1&g=ensGene" + target=_blank>(melUnd1)</a></li> + <li>C. elegans <a href="../cgi-bin/hgTrackUi?db=ce11&g=ensGene" + target=_blank>(ce11)</a></li> + <li>C. intestinalis <a href="../cgi-bin/hgTrackUi?db=ci3&g=ensGene" + target=_blank>(ci3)</a></li> + <li>Cat <a href="../cgi-bin/hgTrackUi?db=felCat9&g=ensGene" + target=_blank>(felCat9)</a></li> + <li>Chicken <a href="../cgi-bin/hgTrackUi?db=galGal6&g=ensGene" + target=_blank>(galGal6)</a></li> + <li>Chimp <a href="../cgi-bin/hgTrackUi?db=panTro5&g=ensGene" + target=_blank>(panTro5)</a></li> + <li>Chinese hamster <a href="../cgi-bin/hgTrackUi?db=criGriChoV1&g=ensGene" + target=_blank>(criGriChoV1)</a></li> + <li>Chinese hamster <a href="../cgi-bin/hgTrackUi?db=criGriChoV2&g=ensGene" + target=_blank>(criGriChoV2)</a></li> + <li>Coelacanth <a href="../cgi-bin/hgTrackUi?db=latCha1&g=ensGene" + target=_blank>(latCha1)</a></li> + <li>Cow <a href="../cgi-bin/hgTrackUi?db=bosTau9&g=ensGene" + target=_blank>(bosTau9)</a></li> + <li>Crab-eating macaque <a href="../cgi-bin/hgTrackUi?db=macFas5&g=ensGene" + target=_blank>(macFas5)</a></li> + <li>D. melanogaster <a href="../cgi-bin/hgTrackUi?db=dm6&g=ensGene" + target=_blank>(dm6)</a></li> + </ul></div> + <div class="col-sm-4"> + <ul> + <li>Dog <a href="../cgi-bin/hgTrackUi?db=canFam3&g=ensGene" + target=_blank>(canFam3)</a></li> + <li>Elephant <a href="../cgi-bin/hgTrackUi?db=loxAfr3&g=ensGene" + target=_blank>(loxAfr3)</a></li> + <li>Elephant shark <a href="../cgi-bin/hgTrackUi?db=calMil1&g=ensGene" + target=_blank>(calMil1)</a></li> + <li>Ferret <a href="../cgi-bin/hgTrackUi?db=musFur1&g=ensGene" + target=_blank>(musFur1)</a></li> + <li>Gibbon <a href="../cgi-bin/hgTrackUi?db=nomLeu3&g=ensGene" + target=_blank>(nomLeu3)</a></li> + <li>Golden snub-nosed monkey <a href="../cgi-bin/hgTrackUi?db=rhiRox1&g=ensGene" + target=_blank>(rhiRox1)</a></li> + <li>Green monkey <a href="../cgi-bin/hgTrackUi?db=chlSab2&g=ensGene" + target=_blank>(chlSab2)</a></li> + <li>Guinea pig <a href="../cgi-bin/hgTrackUi?db=cavPor3&g=ensGene" + target=_blank>(cavPor3)</a></li> + <li>Horse <a href="../cgi-bin/hgTrackUi?db=equCab3&g=ensGene" + target=_blank>(equCab3)</a></li> + <li>Lamprey <a href="../cgi-bin/hgTrackUi?db=petMar2&g=ensGene" + target=_blank>(petMar2)</a></li> + <li>Lizard <a href="../cgi-bin/hgTrackUi?db=anoCar2&g=ensGene" + target=_blank>(anoCar2)</a></li> + <li>Microbat <a href="../cgi-bin/hgTrackUi?db=myoLuc2&g=ensGene" + target=_blank>(myoLuc2)</a></li> + <li>Naked mole-rat <a href="../cgi-bin/hgTrackUi?db=hetGla1&g=ensGene" + target=_blank>(hetGla1)</a></li> + <li>Naked mole-rat <a href="../cgi-bin/hgTrackUi?db=hetGla2&g=ensGene" + target=_blank>(hetGla2)</a></li> + <li>Orangutan <a href="../cgi-bin/hgTrackUi?db=ponAbe2&g=ensGene" + target=_blank>(ponAbe2)</a></li> + </ul></div> +<div class="col-sm-4"> + <ul> + <li>Panda <a href="../cgi-bin/hgTrackUi?db=ailMel1&g=ensGene" + target=_blank>(ailMel1)</a></li> + <li>Pig <a href="../cgi-bin/hgTrackUi?db=susScr11&g=ensGene" + target=_blank>(susScr11)</a></li> + <li>Rabbit <a href="../cgi-bin/hgTrackUi?db=oryCun2&g=ensGene" + target=_blank>(oryCun2)</a></li> + <li>Rhesus <a href="../cgi-bin/hgTrackUi?db=rheMac10&g=ensGene" + target=_blank>(rheMac10)</a></li> + <li>S. cerevisiae <a href="../cgi-bin/hgTrackUi?db=sacCer3&g=ensGene" + target=_blank>(sacCer3)</a></li> + <li>Sheep <a href="../cgi-bin/hgTrackUi?db=oviAri3&g=ensGene" + target=_blank>(oviAri3)</a></li> + <li>Squirrel <a href="../cgi-bin/hgTrackUi?db=speTri2&g=ensGene" + target=_blank>(speTri2)</a></li> + <li>Squirrel monkey <a href="../cgi-bin/hgTrackUi?db=saiBol1&g=ensGene" + target=_blank>(saiBol1)</a></li> + <li>Tarsier <a href="../cgi-bin/hgTrackUi?db=tarSyr2&g=ensGene" + target=_blank>(tarSyr2)</a></li> + <li>Tasmanian devil <a href="../cgi-bin/hgTrackUi?db=sarHar1&g=ensGene" + target=_blank>(sarHar1)</a></li> + <li>Tetraodon <a href="../cgi-bin/hgTrackUi?db=tetNig2&g=ensGene" + target=_blank>(tetNig2)</a></li> + <li>Turkey <a href="../cgi-bin/hgTrackUi?db=melGal1&g=ensGene" + target=_blank>(melGal1)</a></li> + <li>X. tropicalis <a href="../cgi-bin/hgTrackUi?db=xenTro9&g=ensGene" + target=_blank>(xenTro9)</a></li> + </ul></div> +</div></div> +<p> +Thanks to Hiram Clawson and Lou Nassar of the UCSC Genome Browser group for their +work in creating and releasing these tracks.</p> + <a name="040320"></a> <h2>Apr. 2, 2020 First data release for SARS-CoV-2 genome browser</h2> <p> In recent months, we have seen the beginning of the global effort against the coronavirus. Here at the UCSC Genome Browser, we have also been directing some work towards that front and will continue to do so.</p> <p> This has brought new users to our site who may have previously been unfamiliar with this resource. The Genome Browser aims to facilitate genome research by offering data visualization, genome annotations, and other tools. We encourage anyone who would like to learn more to see our <a target="_blank" href="help/hgTracksHelp.html#GetStarted">user guide</a>.</p> <p> With this in mind, we would like to announce a <a target="_blank" href="/covid19.html">new landing page</a> as well as the first release