60cfecd7aaebe7f8804648537fd2fc62f2c7beb6 kuhn Thu Apr 2 16:51:55 2020 -0700 made the R capital in BioRxiv and MedRxiv diff --git src/hg/htdocs/covid19/index.html src/hg/htdocs/covid19/index.html index 31906d0..26ae962 100755 --- src/hg/htdocs/covid19/index.html +++ src/hg/htdocs/covid19/index.html @@ -1,117 +1,117 @@ <!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01//EN" "http://www.w3.org/TR/html4/strict.dtd"> <html> <head> <meta http-equiv="Content-Type" content="text/html; charset=iso-8859-1"> <title>UCSC Genome Browser Covid 19</title> <link rel="stylesheet" href="../style/HGStyle.css" type="text/css"> <link rel="stylesheet" href="../style/encodeProject.css" type="text/css"> <link rel="stylesheet" href="covid.css" type="text/css"> </head> <body style="margin:0;"> <!--#include virtual="../inc/ebola.topbar.html"--> <div class="header"> <span class="txt"> UCSC Covid19 Portal</span> <span class="subHeader">Resources for the pandemic</span> </div> <div style="margin:8px; margin-right:16px;"> <table> <tr> <td colspan="2" style="width:50%"> <div style="margin-top: 0; margin-left: 10px;" class="wrapper"> <div class="bar"><h4 class="title">About</h4></div> <div class="content"> <p> We have fast-tracked the <a target="_blank" href="../cgi-bin/hgTracks?db=wuhCor1">UCSC SARS-Cov2 Genome Browser</a>. Funding for these efforts has come from generous individual donors. <!--This site also provides related tools and information that can be used to further the understanding of SARS-Cov2 and its disease Covid19. --> </p> <p> Downloads for the SARS-Cov2 genome in the UCSC Genome Browser can be found <a href="http://hgdownload.soe.ucsc.edu/downloads.html#sarscov2" target="_blank">here</a>. </p> </div><!--end content--> </td> </tr> <!-- screenshot launchers 2x2 matrix --> <tr> <!-- Browser image linking to browser CGI --> <td style="width:50%"> <div style="margin-top:0; margin-left:10px; margin-right:10px" class="wrapper"> <div class="bar"><h4 class="title">Explore the SARS-Cov2 Genome with the UCSC Browser</h4></div> <div class="content"> <a href="../cgi-bin/hgTracks?db=wuhCor1" target="_blank"><img class="screenshot" src="../images/wuhCor1-shot.png"></a> </div> </div> </td> <!-- Incidence graph linked to CDC site --> <td> <div style="margin-top:0; margin-right: 10px;" class="wrapper"> <div class="bar"><h4 class="title">Explore lung single cell datasets</h4></div> <a href="https://cells-test.gi.ucsc.edu/?ds=eils-lung" target="_blank"> <img style="width: 450px" class="screenshot" src="../images/Illu_bronchi_lungs.jpg"></a> </div> </div> </td> </tr> <!-- Publications block --> <tr> <td colspan="3"> <div style="margin-top: 15px; margin-left: 10px;" class="wrapper"> <div class="bar"><h4 class="title">Related Publications and Data Resources</h4></div> <div class="content"> <p> Nextstrain: <a target="_blank" href="https://nextstrain.org/ncov">SARS-Cov2 browser</a> (strain tree, geographical mapping) <p> <p> NCBI sequence database search, publication list, and genome display: <a href="https://www.ncbi.nlm.nih.gov/genbank/sars-cov-2-seqs/" target="_blank"</a>NCBI Covid19 page</a> </p> </p> Virus Pathogen Resource: <a target="_blank" href="https://www.viprbrc.org/brc/home.spg?decorator=corona_ncov">VIPR Covid19 resource</a> (tools for sequence and structure analysis, comparative genomics and phenotype studies) </p> <p> Preprints: <a href="https://connect.biorxiv.org/relate/content/181" - target="_blank">Biorxiv/Medrxiv Covid19 Collection</a> (all freely available) + target="_blank">BioRxiv/MedRxiv Covid19 Collection</a> (all freely available) </p> </div> </div><!--end content--> </div><!--end wrapper--> </td> </tr> <!-- Ebola Biology block --> <tr> <td colspan="3"> <div style="margin-top: 0; margin-left: 10px;" class="wrapper"> <div class="bar"><h4 class="title">General interest links - to Alexis FAQ? worldometers?</h4></div> <div class="content"> <p> </p> </div><!--end content--> </div><!--end wrapper--> </td> </tr> </table> </body> </html>