Commits for max

v397_preview to v397_preview2 (2020-04-06 to 2020-04-13) v397

ee4a1ee0daaee6d873ecffb909d1496a99512e15 Thu Apr 9 04:22:06 2020 -0700

• kim2020 track for wuhCor1, no redmine yet
  • src/hg/makeDb/trackDb/virus/wuhCor1/kim2020.ra - lines changed 120, context: html, text, full: html, text

9e2b142138375378c3d62889c6e1f613f5e1c052 Thu Apr 9 04:22:42 2020 -0700

• kim2020 track for wuhCor1 include, no redmine yet
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 1, context: html, text, full: html, text

52ec50ee3467f26759aab70724d1e95b89150dc0 Thu Apr 9 06:54:22 2020 -0700

• adding Kim2020 tracks, refs #25332
  • src/hg/makeDb/doc/wuhCor1/kim2020.txt - lines changed 9, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/kim2020.ra - lines changed 4, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/kimNp.html - lines changed 33, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/kimRnaMod.html - lines changed 35, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/primers.html - lines changed 2, context: html, text, full: html, text

fe50c2671682b9dc63e3abff004cfe15c8de5d76 Thu Apr 9 07:47:05 2020 -0700

• update of primers docs page for wuhCor1, refs #25189
  • src/hg/makeDb/trackDb/virus/wuhCor1/primers.html - lines changed 19, context: html, text, full: html, text

bc96e96e131b7402ca47636a4d558afe70f891b7 Thu Apr 9 07:54:36 2020 -0700

• adding makedoc for primers track, refs #25189
  • src/hg/makeDb/doc/wuhCor1/primers.txt - lines changed 9, context: html, text, full: html, text

9e041b5e2a4a27d79e1fa71c218952bf37c427b1 Fri Apr 10 04:22:18 2020 -0700

• fixing clinvar range filter, refs #24850
  • src/hg/makeDb/trackDb/human/trackDb.clinvarTest.ra - lines changed 13, context: html, text, full: html, text

b32c24614a0f1a299474d6a47fbd13c2535c3c46 Fri Apr 10 06:16:27 2020 -0700

• making NCBI genes a default track again and hiding the UniProt full proteins track for now, refs #25332
  • src/hg/makeDb/trackDb/virus/wuhCor1/epitopes.ra - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/ncbiGeneBGP.ra - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.uniprot.ra - lines changed 19, context: html, text, full: html, text

c69f0dd46608a5298ece019177f565eedbda7bb2 Fri Apr 10 07:17:18 2020 -0700

• accidentally showed the Kim 2020 track, hiding again now, refs #25332
  • src/hg/makeDb/trackDb/virus/wuhCor1/kim2020.ra - lines changed 1, context: html, text, full: html, text

e4ff3291cd6b32c9472e61aee808ff476bf9fc15 Fri Apr 10 15:02:07 2020 -0700

• renaming NCBI genes a little, preparing for full Genbank export coming next week, refs #25114
  • src/hg/makeDb/trackDb/virus/wuhCor1/ncbiGeneBGP.html - lines changed 1, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/ncbiGeneBGP.ra - lines changed 1, context: html, text, full: html, text

5b5a679382a739d2170c36ea9fe21135fd1194c8 Fri Apr 10 15:03:17 2020 -0700

• renaming NCBI genes again, refs #25114
  • src/hg/makeDb/trackDb/virus/wuhCor1/ncbiGeneBGP.ra - lines changed 1, context: html, text, full: html, text

913e198cc062676337bef2e795fabcb896272d40 Fri Apr 10 15:25:03 2020 -0700

• adding hub link to user annotation track docs, refs #25297
  • src/hg/makeDb/trackDb/virus/wuhCor1/publicAnnots.html - lines changed 7, context: html, text, full: html, text

1d2b7601cae229ed13d4b644905892ccb356de19 Fri Apr 10 16:11:57 2020 -0700

• making url clickable in user annotations track, refs #25297
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 12, context: html, text, full: html, text

4c36646e0554b3ab094bfa7d49c6f05f381a9ed1 Fri Apr 10 16:43:18 2020 -0700

• adding cas13 track to wuhCor1, no redmine yet.
  • src/hg/makeDb/trackDb/virus/wuhCor1/cas13Crispr.html - lines changed 25, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/primers.html - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 1, context: html, text, full: html, text

f69c4aafb06ef1f4fa452a43bad6290be3b98c27 Sun Apr 12 07:25:57 2020 -0700

• fixing msdos linebreak discovered by nightly build error.
  • src/hg/makeDb/trackDb/virus/wuhCor1/cas13Crispr.html - lines changed 0, context: html, text, full: html, text (a binary file or whitespace-only change or file-permission change shows no diff)