6b5710a00b132c7643e6a7741dd0c3fc33412c83 jnavarr5 Thu May 7 08:43:04 2020 -0700 Updating http to https for ce2, uiLinks cronjob. diff --git src/hg/makeDb/trackDb/twinscan.html src/hg/makeDb/trackDb/twinscan.html index 6639f56..7540d57 100644 --- src/hg/makeDb/trackDb/twinscan.html +++ src/hg/makeDb/trackDb/twinscan.html @@ -1,43 +1,43 @@ <H2>Description</H2> <P> The Twinscan program predicts genes in a manner similar to Genscan, except that Twinscan takes advantage of genome comparisons to improve gene prediction accuracy. More information and a web server can be found at -<A HREF="http://mblab.wustl.edu/" +<A HREF="https://mblab.wustl.edu/" TARGET=_blank>http://mblab.wustl.edu/</A>.</P> <H2>Display Conventions and Configuration</H2> <P> This track follows the display conventions for <A HREF="../goldenPath/help/hgTracksHelp.html#GeneDisplay">gene prediction tracks</A>. </P> <P> The track description page offers the following filter and configuration options: <UL> <LI><B>Color track by codons:</B> Select the <em>genomic codons</em> option to color and label each codon in a zoomed-in display to facilitate validation and comparison of gene predictions. Click the <A HREF="../goldenPath/help/hgCodonColoring.html">Help on codon coloring</A> link on the track description page for more information about this feature. </UL></P> <H2>Methods</H2> <P> The Twinscan algorithm is described in Korf, I. <em>et al.</em> (2001) in the References section below.</P> <H2>Credits</H2> <P> -Thanks to <A HREF="http://mblab.wustl.edu/" +Thanks to <A HREF="https://mblab.wustl.edu/" TARGET=_blank>Michael Brent's Computational Genomics Group</A> at Washington University St. Louis for providing these data.</P> <H2>References</H2> <P> Korf I, Flicek P, Duan D, Brent MR. <A HREF="https://academic.oup.com/bioinformatics/article/17/suppl_1/S140/261903/Integrating-genomic-homology-into-gene-structure" TARGET=_blank>Integrating genomic homology into gene structure prediction</A>. <em>Bioinformatics</em>. 2001;17 Suppl 1:S140-8. PMID: <a href="https://www.ncbi.nlm.nih.gov/pubmed/11473003" target="_blank">11473003</a> </p>