1cec534c306475b701fb148763bc3edc021a0be5
kate
  Mon May 4 16:35:08 2020 -0700
Fix formatting error in track description. refs #25130

diff --git src/hg/makeDb/trackDb/human/gtexGeneV8.html src/hg/makeDb/trackDb/human/gtexGeneV8.html
index 901a6d3..9cd4a10 100644
--- src/hg/makeDb/trackDb/human/gtexGeneV8.html
+++ src/hg/makeDb/trackDb/human/gtexGeneV8.html
@@ -49,58 +49,51 @@
 NCI histopathology viewer</a>.
 The Qiagen PAXgene non-formalin tissue preservation product was used to stabilize 
 tissue specimens without cross-linking biomolecules.</P>
 <P>
 RNA-seq was performed by the GTEx Laboratory, Data Analysis and Coordinating Center 
 (LDACC) at the Broad Institute.
 The Illumina TruSeq protocol was used to create an unstranded polyA+ library sequenced
 on the Illumina HiSeq 2000 and HiSeq 2500 platforms to produce 76-bp paired end reads with a coverage
 goal of 50M (median achieved was ~82M total reads).
 </P>
 Sequence reads were aligned to the hg38/GRCh38 human genome using STAR v2.5.3a
 assisted by the GENCODE 26 transcriptome definition. 
 The alignment pipeline is available
 <a target="_blank" href="https://github.com/broadinstitute/gtex-pipeline/tree/master/rnaseq">here</a>.
 </p>
-<a>
+<p>
 Gene annotations were produced using a custom isoform collapsing procedure that excluded
 retained intron and read through transcripts, merged overlapping exon intervals and then excluded
 exon intervals overlapping between genes.
 Gene expression levels in TPM were called via the RNA-SeQC tool (v1.1.9), after filtering for 
 unique mapping, proper pairing, and exon overlap.
 For further method details, see the 
 <a target="_blank" href="https://gtexportal.org/home/documentationPage#staticTexAnalysisMethods">
-GTEx Portal Documentation</a> page.
+GTEx Portal Documentation</a> page.</p>
 <P>
 UCSC obtained the gene-level expression files, gene annotations and sample metadata from the 
 GTEx Portal Download page.
 Median expression level in TPM was computed per gene/per tissue.</P>
 
 <H2>Subject and Sample Characteristics</H2>
 <P>
 The scientific goal of the GTEx project required that the donors and their biospecimen 
 present with no evidence of disease. 
 The tissue types collected were chosen based on their clinical significance, logistical 
 feasibility and their relevance to the scientific goal of the project and the 
 research community. 
-<!--
-Postmortem samples were collected from non-diseased donors with ages ranging from 20 to 79. 34.4% of donors were female and 65.6% male. 
-<div> <img border=1 src='/images/gtex/gtexSampleRin.V6.png'></div>
-<p></p>
-<div><img border=1 src='/images/gtex/gtexSampleAge.V6.png'></div></p>
-<p>
--->
 Summary plots of GTEx sample characteristics are available at the 
 <a target="_blank" href="https://gtexportal.org/home/tissueSummaryPage">
 GTEx Portal Tissue Summary</a> page.</p>
 
 
 <h2>Data Access</h2>
 <p>
 The raw data for the GTEx Gene expression track can be accessed interactively through the 
 <a href="hgTables?db=$db&hgta_track=$db&hgta_group=allTables&hgta_table=gtexGeneV8">
 Table Browser</a> or <a href="hgIntegrator">Data Integrator</a>. Metadata can be 
 found in the connected tables below.
 <ul>
 <li><strong><a 
 href="hgTables?db=$db&hgta_track=$db&hgta_group=allTables&hgta_table=gtexGeneModelV8">
 gtexGeneModelV8</a></strong> describes the gene names and coordinates in genePred format.</li>