7e47092189d71484b444f08b569c67b1a933c6d0 kate Tue May 5 14:24:43 2020 -0700 Add Mouse cCRE track from ENCODE. refs #24668 diff --git src/hg/makeDb/trackDb/trackDb.encode3.ra src/hg/makeDb/trackDb/trackDb.encode3.ra new file mode 100644 index 0000000..92952f8 --- /dev/null +++ src/hg/makeDb/trackDb/trackDb.encode3.ra @@ -0,0 +1,16 @@ +track encodeCcreCombined +release alpha +type bigBed 9 + +shortLabel ENCODE cCREs +longLabel ENCODE Candidate Cis-Regulatory Elements (cCREs) combined from all cell types +bigDataUrl /gbdb/$D/encode3/ccre/encodeCcreCombined.bigBed +mouseOverField ccre +bedNameLabel ENCODE Accession +urlLabel cCRE details at ENCODE SCREEN: +skipFields classification +filterValues.ccre PLS|promoter-like (PLS),pELS|proximal enhancer-like (pELS),pELS,,CTCF-bound|proximal enhancer-like (pELS),,CTCF-bound,dELS|distal enhancer-like (dELS),dELS|distal enhancer-like (dELS),,CTCF-bound,CTCF-only,,CTCF-bound|CTCF only,DNase-H3K4me3|DNase-H3K4me3,DNase-H3K4me3,,CTCF-bound|DNase-H3K4me3,,CTCF-bound +itemRgb On +wgEncode 1 +group regulation +pennantIcon New red +