Commits for braney

v398_preview to v398_preview2 (2020-04-27 to 2020-05-04) v398

5db92eefaeb955d7a2a5b152b0ee9bfa9a979c69 Tue Apr 28 11:25:17 2020 -0700

• add . after type bigBed
  • src/hg/makeDb/trackDb/virus/wuhCor1/kim2020.ra - lines changed 3, context: html, text, full: html, text

0de7cb7d6e9595fcb877544d666e099f7562314d Tue Apr 28 12:46:36 2020 -0700

• tg->visibility isn't always set for subtracks if they're parallel loading
  • src/hg/hgTracks/vcfTrack.c - lines changed 2, context: html, text, full: html, text

f687ccdef74c5ad851a7e2e7ffe76b74dbbfbec4 Thu Apr 30 03:30:32 2020 -0700

• remove typo
  • src/hg/makeDb/trackDb/virus/wuhCor1/publicAnnots.html - lines changed 1, context: html, text, full: html, text

679ac58542b7d783a88863aa779a630637b2aebf Thu Apr 30 11:18:36 2020 -0700

• take off trailing + on comments subtrack because we don't want score filters
  • src/hg/makeDb/trackDb/human/hg19/trackDb.ra - lines changed 2, context: html, text, full: html, text

037036926221d64f84d7594254a78f008e10b777 Thu Apr 30 15:55:02 2020 -0700

• A version of NCBI genes generated from the genbank record instead of the GFF, changed the name of the shorter orf1ab to orf1a
  • src/hg/makeDb/trackDb/virus/wuhCor1/ncbiGene.ra - lines changed 45, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/ncbiGeneBGP.html - lines changed 12, context: html, text, full: html, text
  • src/hg/makeDb/trackDb/virus/wuhCor1/trackDb.ra - lines changed 2, context: html, text, full: html, text

84b209a8c6517af21f733b68744e78897063fbf4 Thu Apr 30 16:10:51 2020 -0700

• some very basic makeDoc for NCBI Genes
  • src/hg/makeDb/doc/wuhCor1/ncbiGene.txt - lines changed 7, context: html, text, full: html, text

e3871e1871d6158d4712b3ae6c41b62eb77ffcd1 Fri May 1 12:29:24 2020 -0700

• for Galt
  • src/hg/inc/blatServers.h - lines changed 18, context: html, text, full: html, text

d676882c7f64619f14d512a77fa9aed71890547e Sat May 2 10:39:17 2020 -0700

• tweak the mafSnp tables on wuhCor1 a bit to change codingVariants that aren't syn or nonsyn into missing data
  • src/hg/makeDb/doc/wuhCor1/snpView.44way.txt - lines changed 2, context: html, text, full: html, text
  • src/hg/makeDb/doc/wuhCor1/snpView.txt - lines changed 2, context: html, text, full: html, text

4fb6df366f380117bae142682857a813176bb204 Sat May 2 13:47:10 2020 -0700

• increase label width from 17 to 23 characters
  • src/hg/hgTracks/simpleTracks.c - lines changed 2, context: html, text, full: html, text

7bc17a364b67139d78eed6ea6a589f6d7c9826cc Mon May 4 09:18:12 2020 -0700

• label width down to 20
  • src/hg/hgTracks/simpleTracks.c - lines changed 2, context: html, text, full: html, text

1542a6da7c8cb7c15f92df47a06c9ddaa6167797 Mon May 4 09:54:02 2020 -0700

• v398 preview2, refs #25471
  • src/utils/qa/weeklybld/buildEnv.csh - lines changed 2, context: html, text, full: html, text