d96751b9e97f16417a020a9f6356432e6d102bc1
kate
  Wed Apr 29 10:21:59 2020 -0700
Correct tissue description, as per GTEx portal page for V8. refs #25130

diff --git src/hg/makeDb/doc/gtex/V6.txt src/hg/makeDb/doc/gtex/V6.txt
index b7d5aca..3755d14 100644
--- src/hg/makeDb/doc/gtex/V6.txt
+++ src/hg/makeDb/doc/gtex/V6.txt
@@ -114,16 +114,30 @@
 hgLoadSqlTab hgFixed gtexTissueMedianV6 ~kate/kent/src/hg/lib/gtexTissueMedian.sql \
                 $dir/gtex4V6TissueMedianAll.tab
 
 ############
 # Add GTEX consortium abbreviation column to tissue table (e.g. for ASE)
 
 cd /hive/data/outside/gtex/V6/metadata
 hgsql hgFixed -e 'select * from gtexTissue' > gtexTissue.old.tab
 
 awk -F"\t" 'NR>1 {print $2}' gtex_tissue_colors.txt  | paste gtexTissue.old.tab - > gtexTissue.new.tab
 hgLoadSqlTab hgFixed gtexTissueNew ~kate/kent/src/hg/lib/gtexTissue.sql $dir/gtexTissue.new.tab
 hgsql hgFixed -e 'alter table gtexTissueV6 rename to gtexTissueV6Old; alter table gtexTissueNew rename to gtexTissueV6'
 
 # Test GTEx track on hgwdev still works with new table
 
+############
+# Correct cell type description, as per V8 portal page
+# 4/29/20 KRR
+
+ [hgFixed]> select * from gtexTissue where name like '%fibro%';
++----+--------------------+---------------------------------+-------+----------+---------+
+| id | name               | description                     | organ | color    | abbrev  |
++----+--------------------+---------------------------------+-------+----------+---------+
+| 22 | xformedfibroblasts | Cells - Transformed fibroblasts | Skin  | 10141901 | FIBRBLS |
++----+--------------------+---------------------------------+-------+----------+---------+
+1 row in set (0.00 sec)
+
+MariaDB [hgFixed]> update gtexTissue set description="Cells - Cultured fibroblasts" where id=22;
+