832926811b278d5c656957e1565acdde48522def
kate
  Mon Apr 27 17:59:12 2020 -0700
Update GTEx gene track click handler and track settings to handle V8 (add Kidney Medulla tissue, support TPM and RPKM). refs #25130

diff --git src/hg/inc/gtexInfo.h src/hg/inc/gtexInfo.h
index be2ffe1..f0e02a2 100644
--- src/hg/inc/gtexInfo.h
+++ src/hg/inc/gtexInfo.h
@@ -1,100 +1,103 @@
 /* gtexInfo.h was originally generated by the autoSql program, which also 
  * generated gtexInfo.c and gtexInfo.sql.  This header links the database and
  * the RAM representation of objects. */
 
 #ifndef GTEXINFO_H
 #define GTEXINFO_H
 
 #include "jksql.h"
 #include "hdb.h"
 #define GTEXINFO_NUM_COLS 4
 
 extern char *gtexInfoCommaSepFieldNames;
 
 struct gtexInfo
 /* GTEx general information */
     {
     struct gtexInfo *next;  /* Next in singly linked list. */
     char *version;	/* GTEX data release (e.g. V4, V6) */
     char *releaseDate;	/* Release date */
     double maxScore;	/* Maximum score observed (use to scale display) */
     double maxMedianScore;	/* Maximum score observed for a tissue median (use to scale display) */
     };
 
 void gtexInfoStaticLoad(char **row, struct gtexInfo *ret);
 /* Load a row from gtexInfo table into ret.  The contents of ret will
  * be replaced at the next call to this function. */
 
 struct gtexInfo *gtexInfoLoadByQuery(struct sqlConnection *conn, char *query);
 /* Load all gtexInfo from table that satisfy the query given.  
  * Where query is of the form 'select * from example where something=something'
  * or 'select example.* from example, anotherTable where example.something = 
  * anotherTable.something'.
  * Dispose of this with gtexInfoFreeList(). */
 
 void gtexInfoSaveToDb(struct sqlConnection *conn, struct gtexInfo *el, char *tableName, int updateSize);
 /* Save gtexInfo as a row to the table specified by tableName. 
  * As blob fields may be arbitrary size updateSize specifies the approx size
  * of a string that would contain the entire query. Arrays of native types are
  * converted to comma separated strings and loaded as such, User defined types are
  * inserted as NULL. This function automatically escapes quoted strings for mysql. */
 
 struct gtexInfo *gtexInfoLoad(char **row);
 /* Load a gtexInfo from row fetched with select * from gtexInfo
  * from database.  Dispose of this with gtexInfoFree(). */
 
 struct gtexInfo *gtexInfoLoadAll(char *fileName);
 /* Load all gtexInfo from whitespace-separated file.
  * Dispose of this with gtexInfoFreeList(). */
 
 struct gtexInfo *gtexInfoLoadAllByChar(char *fileName, char chopper);
 /* Load all gtexInfo from chopper separated file.
  * Dispose of this with gtexInfoFreeList(). */
 
 #define gtexInfoLoadAllByTab(a) gtexInfoLoadAllByChar(a, '\t');
 /* Load all gtexInfo from tab separated file.
  * Dispose of this with gtexInfoFreeList(). */
 
 struct gtexInfo *gtexInfoCommaIn(char **pS, struct gtexInfo *ret);
 /* Create a gtexInfo out of a comma separated string. 
  * This will fill in ret if non-null, otherwise will
  * return a new gtexInfo */
 
 void gtexInfoFree(struct gtexInfo **pEl);
 /* Free a single dynamically allocated gtexInfo such as created
  * with gtexInfoLoad(). */
 
 void gtexInfoFreeList(struct gtexInfo **pList);
 /* Free a list of dynamically allocated gtexInfo's */
 
 void gtexInfoOutput(struct gtexInfo *el, FILE *f, char sep, char lastSep);
 /* Print out gtexInfo.  Separate fields with sep. Follow last field with lastSep. */
 
 #define gtexInfoTabOut(el,f) gtexInfoOutput(el,f,'\t','\n');
 /* Print out gtexInfo as a line in a tab-separated file. */
 
 #define gtexInfoCommaOut(el,f) gtexInfoOutput(el,f,',',',');
 /* Print out gtexInfo as a comma separated list including final comma. */
 
 /* -------------------------------- End autoSql Generated Code -------------------------------- */
 
 #endif /* GTEXINFO_H */
 
 #define GTEX_DEFAULT_VERSION    "V6"
 
 void gtexInfoCreateTable(struct sqlConnection *conn, char *table);
 /* Create GTEx info table */
 
 double gtexMaxMedianScore(char *version);
 /* Retrieve max median score for latest (or named) version */
 
 char *gtexVersionSuffix(char *table);
 /* Return version string for a GTEx track table.  For now, just supporting V4 and V6 (default, no suffix )*/                                        
 
 char *gtexVersion(char *table);
 /* Return version string based on table suffix */
 
 char *gtexVersionSuffixFromVersion(char *version);
 /* Return version table suffix for a version */
 
+char *gtexExprUnit(char *version);
+/* Units of gene expression */
+