808fa9a4c306d2d85df51d5c7c8ea9976a0fb0f1
max
  Thu Apr 30 11:41:48 2020 -0700
adding genbankToBigGenePred tool, right now only for wuhCor1 assembly, but possibly useful elsewhere, as per emails with Braney

diff --git src/hg/lib/genbankBed12.as src/hg/lib/genbankBed12.as
new file mode 100644
index 0000000..fdef194
--- /dev/null
+++ src/hg/lib/genbankBed12.as
@@ -0,0 +1,18 @@
+table genbankBed12
+"genbank annotations not related to genes"
+(
+   string chrom;       "Reference sequence chromosome or scaffold"
+   uint   chromStart;  "Start position in chromosome"
+   uint   chromEnd;    "End position in chromosome"
+   string name;        "Name or ID of item, ideally both human readable and unique"
+   uint score;         "Score (0-1000)"
+   char[1] strand;     "+ or - for strand"
+   uint thickStart;    "Start of where display should be thick (start codon)"
+   uint thickEnd;      "End of where display should be thick (stop codon)"
+   uint reserved;       "RGB value (use R,G,B string in input file)"
+   int blockCount;     "Number of blocks"
+   int[blockCount] blockSizes; "Comma separated list of block sizes"
+   int[blockCount] chromStarts; "Start positions relative to chromStart"
+   string inference;    "Inference"
+   string function;    "Function"
+)