ded5fbfbae9e713b69de8aeef0efad8719034b07
hiram
  Wed May 27 17:34:00 2020 -0700
rework scripts to allow subset hubs to be created from a list of assemblies refs #23734

diff --git src/hg/makeDb/doc/vgpAsmHub/altMakefile src/hg/makeDb/doc/vgpAsmHub/altMakefile
new file mode 100644
index 0000000..5cf4376
--- /dev/null
+++ src/hg/makeDb/doc/vgpAsmHub/altMakefile
@@ -0,0 +1,26 @@
+
+## makefile definitions for a VGP subset of genomes with user supplied
+## data tracks
+
+destDir=/hive/data/genomes/asmHubs/vgp
+srcDir=${HOME}/kent/src/hg/makeDb/doc/vgpAsmHub
+orderList=vgp.alternate.orderList.tsv
+
+indexName=vgpAlt
+testIndexName=testVgpAlt
+statsName=vgpAltStats
+testStatsName=testVgpAltStats
+dataName=vgpAltData
+testDataName=testVgpAltData
+genomesTxt=altGenomes
+hubFile=altHub
+testHubFile=testAltHub
+
+# these names trigger special behavior in the index page creation scripts:
+Name=VGP
+name=vgp
+
+# GCA_009859025.1_bTaeGut2.p.v1.alt	zebra finch
+defaultAssembly=GCA_009859025.1_bTaeGut2.p.v1.alt
+
+include ../asmHubs/asmHubs.mk